RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PDHXO00330 501 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
ERCC8-208ENST00000497892 BACE1P56817 501 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 MTMR2Q13614 643 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
ERCC8-208ENST00000497892 SH3D19Q5HYK7 790 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 COL13A1Q5TAT6 717 aaPredicted RBP13.41□□□□□ -0.26
ERCC8-208ENST00000497892 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 TMEM179Q6ZVK1 233 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
ERCC8-208ENST00000497892 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 CABP5Q9NP86 173 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 SLC45A1Q9Y2W3 748 aa13.41□□□□□ -0.26
ERCC8-208ENST00000497892 GPR25O00155 361 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
ERCC8-208ENST00000497892 AKR1B1P15121 316 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 HMGCS2P54868 508 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 SEPT2Q15019 361 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 ALX1Q15699 326 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 CWC27Q6UX04 472 aaKnown RBP13.4□□□□□ -0.26
ERCC8-208ENST00000497892 GADL1Q6ZQY3 521 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
ERCC8-208ENST00000497892 ZFYVE28Q9HCC9 887 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 AGTPBP1Q9UPW5 1226 aa13.4□□□□□ -0.26
ERCC8-208ENST00000497892 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 C19orf81C9J6K1 198 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
ERCC8-208ENST00000497892 RASA1P20936 1047 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 PPARAQ07869 468 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 DGKZQ13574 1117 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 TREML2Q5T2D2 321 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
ERCC8-208ENST00000497892 PARK7Q99497 189 aaKnown RBP13.39□□□□□ -0.27
ERCC8-208ENST00000497892 ZNF287Q9HBT7 754 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 RAD50Q92878 1312 aa13.39□□□□□ -0.27
ERCC8-208ENST00000497892 TLR2O60603 784 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
ERCC8-208ENST00000497892 DSG2Q14126 1118 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 C12orf42Q96LP6 360 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 FEZ1Q99689 392 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 KIAA1683Q9H0B3 1180 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 IL25Q9H293 177 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
ERCC8-208ENST00000497892 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 FKTNO75072 461 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 FGAP02671 866 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 CYP2C8P10632 490 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 CHMLP26374 656 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 ICA1Q05084 483 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 PDE4BQ07343 736 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 BMP2KLQ5H9B9 411 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 CLEC10AQ8IUN9 316 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERCC8-208ENST00000497892 EMILIN3Q9NT22 766 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
ERCC8-208ENST00000497892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERCC8-208ENST00000497892 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 A0A1W2PRG0 241 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 PRDM1O75626 825 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 USP14P54578 494 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERCC8-208ENST00000497892 USP17L2Q6R6M4 530 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
ERCC8-208ENST00000497892 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 VCAM1P19320 739 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
ERCC8-208ENST00000497892 PBX2P40425 430 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERCC8-208ENST00000497892 SP3Q02447 781 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
ERCC8-208ENST00000497892 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 SMCR8Q8TEV9 937 aaPredicted RBP13.35□□□□□ -0.27
ERCC8-208ENST00000497892 RNF166Q96A37 237 aaPredicted RBP13.35□□□□□ -0.27
ERCC8-208ENST00000497892 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
ERCC8-208ENST00000497892 MGAMO43451 1857 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 A0A0G2JMZ2 1700 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 IGKV6D-41A0A0C4DH26 115 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 SGSM2O43147 1006 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 ORC4O43929 436 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 FGRP09769 529 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 BCRP11274 1271 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms