RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 PLEKHA8P1O95397 391 aa28.31■■■□□ 2.12
TNFRSF4-203ENST00000497869 SLC35G1Q2M3R5 365 aa28.31■■■□□ 2.12
TNFRSF4-203ENST00000497869 STAG2Q8N3U4 1231 aa28.31■■■□□ 2.12
TNFRSF4-203ENST00000497869 USP17L5A8MUK1 530 aa28.3■■■□□ 2.12
TNFRSF4-203ENST00000497869 ASNSP08243 561 aa28.3■■■□□ 2.12
TNFRSF4-203ENST00000497869 FUT2Q10981 343 aa28.3■■■□□ 2.12
TNFRSF4-203ENST00000497869 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.3■■■□□ 2.12
TNFRSF4-203ENST00000497869 MAD2L2Q9UI95 211 aa28.3■■■□□ 2.12
TNFRSF4-203ENST00000497869 PTPDC1A2A3K4 754 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 FDPSP14324 419 aaKnown RBP28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 GRM4Q14833 912 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 KIAA1755Q5JYT7 1200 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 NBPF11Q86T75 865 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 GOLGA8HP0CJ92 632 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 SNHG28P0DPA3 235 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 PDHBP11177 359 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 GJB2P29033 226 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 USP17L2Q6R6M4 530 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 SCYL3Q8IZE3 742 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 DDX11Q96FC9 970 aa28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.29■■■□□ 2.12
TNFRSF4-203ENST00000497869 CALM1P0DP23 149 aa28.28■■■□□ 2.12
TNFRSF4-203ENST00000497869 CALM2P0DP24 149 aa28.28■■■□□ 2.12
TNFRSF4-203ENST00000497869 CALM3P0DP25 149 aa28.28■■■□□ 2.12
TNFRSF4-203ENST00000497869 PHKBQ93100 1093 aa28.28■■■□□ 2.12
TNFRSF4-203ENST00000497869 LLPHQ9BRT6 129 aaKnown RBP28.28■■■□□ 2.12
TNFRSF4-203ENST00000497869 CCDC82Q8N4S0 544 aa28.27■■■□□ 2.12
TNFRSF4-203ENST00000497869 SRBD1Q8N5C6 995 aaKnown RBP28.27■■■□□ 2.12
TNFRSF4-203ENST00000497869 SMC3Q9UQE7 1217 aa28.27■■■□□ 2.12
TNFRSF4-203ENST00000497869 PAPPA2Q9BXP8 1791 aa28.27■■■□□ 2.12
TNFRSF4-203ENST00000497869 PALM3A6NDB9 673 aaPredicted RBP28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 PKP1Q13835 747 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 TMTC3Q6ZXV5 915 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 MAP3K14Q99558 947 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 CPVLQ9H3G5 476 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 TMX2Q9Y320 296 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 SNCAIPQ9Y6H5 919 aa28.26■■■□□ 2.12
TNFRSF4-203ENST00000497869 PTPRAP18433 802 aa28.26■■■□□ 2.11
TNFRSF4-203ENST00000497869 VGLL4Q14135 290 aa28.26■■■□□ 2.11
TNFRSF4-203ENST00000497869 NOL9Q5SY16 702 aaKnown RBP28.26■■■□□ 2.11
TNFRSF4-203ENST00000497869 F5H6K3 240 aa28.25■■■□□ 2.11
TNFRSF4-203ENST00000497869 IFNAR1P17181 557 aa28.25■■■□□ 2.11
TNFRSF4-203ENST00000497869 KLRC3Q07444 240 aa28.25■■■□□ 2.11
TNFRSF4-203ENST00000497869 CTCFLQ8NI51 663 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF4-203ENST00000497869 FRMPD2Q68DX3 1309 aaPredicted RBP28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 CPLX1O14810 134 aa28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 PPP1R12BO60237 982 aaPredicted RBP28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 ITGBL1O95965 494 aaPredicted RBP28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 NDUFB10O96000 172 aa28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 MAP3K9P80192 1104 aa28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 DGKZQ13574 1117 aa28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 PPP4R3BQ5MIZ7 849 aa28.24■■■□□ 2.11
TNFRSF4-203ENST00000497869 MAP3K11Q16584 847 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 CLMNQ96JQ2 1002 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 GINM1Q9NU53 330 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 ATAD5Q96QE3 1844 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 CYTH3O43739 400 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 DHX16O60231 1041 aaKnown RBP28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 SLFN13Q68D06 897 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 GMCL1P1Q8NEA9 526 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 CNKSR2Q8WXI2 1034 aa28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 NUP88Q99567 741 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 CWC22Q9HCG8 908 aaKnown RBP28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 RBM28Q9NW13 759 aaKnown RBP28.23■■■□□ 2.11
TNFRSF4-203ENST00000497869 KIF3CO14782 793 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 PPP2R5BQ15173 497 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 TTBK2Q6IQ55 1244 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 SPICE1Q8N0Z3 855 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 AIFM3Q96NN9 605 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 ZNF408Q9H9D4 720 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 ARHGEF10LQ9HCE6 1279 aa28.22■■■□□ 2.11
TNFRSF4-203ENST00000497869 CNTNAP5Q8WYK1 1306 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 MYH4Q9Y623 1939 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 CCDC196A0A1B0GTZ2 297 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 hCG_1642624A0A1W2PR95 340 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 NF2P35240 595 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 ZNF543Q08ER8 600 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 ZYXQ15942 572 aaKnown RBP28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 CHADLQ6NUI6 762 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 KCTD1Q719H9 257 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 DOCK1Q14185 1865 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 PARP1P09874 1014 aaKnown RBP28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 SLC26A6Q9BXS9 759 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 UBA5Q9GZZ9 404 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 GPBP1L1Q9HC44 474 aaPredicted RBP28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 GPCPD1Q9NPB8 672 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 SYNPO2Q9UMS6 1093 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 ZDHHC9Q9Y397 364 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 ZHX2Q9Y6X8 837 aa28.21■■■□□ 2.11
TNFRSF4-203ENST00000497869 OTOFQ9HC10 1997 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 KLRF2D3W0D1 207 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 RAD21O60216 631 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 FMNL1O95466 1100 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 KIF5BP33176 963 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 IREB2P48200 963 aaKnown RBP28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 PICK1Q9NRD5 415 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 GJB4Q9NTQ9 266 aa28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 ORC3Q9UBD5 711 aaPredicted RBP28.2■■■□□ 2.1
TNFRSF4-203ENST00000497869 SPP2Q13103 211 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms