RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 FGD2Q7Z6J4 655 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 GSTCDQ8NEC7 633 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 VPS37AQ8NEZ2 397 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 GJA10Q969M2 543 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 PLCB1Q9NQ66 1216 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 REV1Q9UBZ9 1251 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 NDOR1Q9UHB4 597 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 ANKRD6Q9Y2G4 727 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 CORINQ9Y5Q5 1042 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 WASF2Q9Y6W5 498 aa7.57□□□□□ -1.2
BRCA1-224ENST00000497488 GFRA2O00451 464 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PIP5K1CO60331 668 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 GDF9O60383 454 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PRKD3O94806 890 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 SNUPNO95149 360 aaKnown RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 JMJD7P0C870 316 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 SRGNP10124 158 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PF4V1P10720 104 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PYGMP11217 842 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PABPC1P11940 636 aaKnown RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 SELPP16109 830 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 WDR4P57081 412 aaKnown RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 L1TD1Q5T7N2 865 aaKnown RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 ADAMTSL4Q6UY14 1074 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 EPM2AIP1Q7L775 607 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 CBARPQ8N350 705 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 MEIOBQ8N635 442 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PDILTQ8N807 584 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 OR2W6PQ8NHA6 318 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 CLIP3Q96DZ5 547 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 CRISPLD1Q9H336 500 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 SLC52A2Q9HAB3 445 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-224ENST00000497488 PKD2L1Q9P0L9 805 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 RCAN3Q9UKA8 241 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 ZBTB21Q9ULJ3 1066 aa7.56□□□□□ -1.2
BRCA1-224ENST00000497488 K7ESF4 209 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 ERC2O15083 957 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 PRODHO43272 600 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 TIMM44O43615 452 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 GFRA3O60609 400 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 DNAJA2O60884 412 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 IGFALSP35858 605 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 SARSP49591 514 aaKnown RBP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 PCDH1Q08174 1060 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 GALEQ14376 348 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 KRT72Q14CN4 511 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 CCDC174Q6PII3 467 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 MPRIPQ6WCQ1 1025 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 TTC17Q96AE7 1141 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 TRMT2BQ96GJ1 504 aaKnown RBP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 FUBP3Q96I24 572 aaKnown RBP eCLIP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 NEUROD6Q96NK8 337 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 NSUN5Q96P11 429 aaKnown RBP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 POLMQ9NP87 494 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 DDX21Q9NR30 783 aaKnown RBP eCLIP7.55□□□□□ -1.2
BRCA1-224ENST00000497488 SUSD2Q9UGT4 822 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 GTF2IRD1Q9UHL9 959 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 PHTF1Q9UMS5 762 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 FAM50BQ9Y247 325 aa7.55□□□□□ -1.2
BRCA1-224ENST00000497488 FRMPD2Q68DX3 1309 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-224ENST00000497488 ANKRD34BA5PLL1 514 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 SPINT1O43278 529 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 EFCAB14O75071 495 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CAPNS1P04632 268 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 MYBL2P10244 700 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 TIMP2P16035 220 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 TYRP1P17643 537 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 NFKB1P19838 968 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CYP2C19P33261 490 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 FLT3P36888 993 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 GJA9P57773 515 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 RASSF7Q02833 373 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 SFSWAPQ12872 951 aaKnown RBP7.54□□□□□ -1.2
BRCA1-224ENST00000497488 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 ZNF423Q2M1K9 1284 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 INAVAQ3KP66 663 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CFAP100Q494V2 611 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 GPR158Q5T848 1215 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CYB5RLQ6IPT4 315 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 ZNF227Q86WZ6 799 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 ZNF354CQ86Y25 554 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CACTIN-AS1Q8N1I8 211 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CPA6Q8N4T0 437 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 CDC5LQ99459 802 aaKnown RBP7.54□□□□□ -1.2
BRCA1-224ENST00000497488 PBX4Q9BYU1 374 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms