RNA–Protein interactions for RNA: ENST00000497423.1

LCLAT1-212, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-212ENST00000497423 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
LCLAT1-212ENST00000497423 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
LCLAT1-212ENST00000497423 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
LCLAT1-212ENST00000497423 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
LCLAT1-212ENST00000497423 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
LCLAT1-212ENST00000497423 KIAA0100Q14667 2235 aaKnown RBP16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 COG2Q14746 738 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 ALX1Q15699 326 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 SLAIN1Q8ND83 568 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 FAM227BQ96M60 508 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 BRCA2P51587 3418 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 RLFQ13129 1914 aa16.47■□□□□ 0.23
LCLAT1-212ENST00000497423 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 ADCY3O60266 1144 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 PEX10O60683 326 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 CNMDO75829 334 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 SDSP20132 328 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 MAPK4P31152 587 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 PDE4BQ07343 736 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 PPARAQ07869 468 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 ANAPC4Q9UJX5 808 aa16.46■□□□□ 0.23
LCLAT1-212ENST00000497423 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 MKL1Q969V6 931 aa16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
LCLAT1-212ENST00000497423 PDE4AP27815 886 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 DSG3P32926 999 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 UBXN2AP68543 259 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 CCNA1P78396 465 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 MTFR1Q15390 333 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 NEDD1Q8NHV4 660 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 PORCNQ9H237 461 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
LCLAT1-212ENST00000497423 PLIN4Q96Q06 1357 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 PRDM1O75626 825 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 FGAP02671 866 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 FGRP09769 529 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 EN2P19622 333 aaPredicted RBP16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 ZNF589Q86UQ0 364 aaPredicted RBP16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 SPICE1Q8N0Z3 855 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 USP6NLQ92738 828 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 MTMR4Q9NYA4 1195 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 ZMYM6O95789 1325 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 CCDC171Q6TFL3 1326 aa16.43■□□□□ 0.22
LCLAT1-212ENST00000497423 PARP14Q460N5 1801 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 HIP1O00291 1037 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 XRCC5P13010 732 aaKnown RBP16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 ELNP15502 786 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 MORN1Q5T089 497 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 PLEKHH3Q7Z736 793 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 SOCS4Q8WXH5 440 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 BIN2Q9UBW5 565 aaPredicted RBP16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 CLIP2Q9UDT6 1046 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 ADAMTS5Q9UNA0 930 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
LCLAT1-212ENST00000497423 MKI67P46013 3256 aaKnown RBP16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 F5H6K3 240 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 FLOT1O75955 427 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 GJB1P08034 283 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 CCL5P13501 91 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 TFAP4Q01664 338 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 KLRC3Q07444 240 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 CEP95Q96GE4 821 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
LCLAT1-212ENST00000497423 ORC4O43929 436 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 TTLL1O95922 423 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 INHAP05111 366 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 TACC3Q9Y6A5 838 aa16.4■□□□□ 0.22
LCLAT1-212ENST00000497423 HMGCRP04035 888 aa16.39■□□□□ 0.21
LCLAT1-212ENST00000497423 CAPN2P17655 700 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms