RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
MSH5-219ENST00000497269 NOC4LQ9BVI4 516 aaKnown RBP8.56□□□□□ -1.04
MSH5-219ENST00000497269 KBTBD4Q9NVX7 518 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 PCDHA4Q9UN74 947 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 SRCAPQ6ZRS2 3230 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 GAS2O43903 313 aaKnown RBP8.55□□□□□ -1.04
MSH5-219ENST00000497269 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
MSH5-219ENST00000497269 TFE3P19532 575 aaPredicted RBP8.55□□□□□ -1.04
MSH5-219ENST00000497269 FANCCQ00597 558 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
MSH5-219ENST00000497269 ZNF252P-AS1Q0IIN9 211 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
MSH5-219ENST00000497269 DYMQ7RTS9 669 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 TP53INP1Q96A56 240 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 PCDHGB7Q9Y5F8 929 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
MSH5-219ENST00000497269 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 DCDC2CA8MYV0 355 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 E9PSI1 815 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 ADH5P11766 374 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 VAMP1P23763 118 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
MSH5-219ENST00000497269 RNF34Q969K3 372 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 UTP4Q969X6 686 aaKnown RBP8.54□□□□□ -1.04
MSH5-219ENST00000497269 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
MSH5-219ENST00000497269 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
MSH5-219ENST00000497269 ARHGEF10O15013 1369 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 SCAMP3O14828 347 aaKnown RBP8.53□□□□□ -1.04
MSH5-219ENST00000497269 PF4P02776 101 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 CDK8P49336 464 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 ANKRD34AQ69YU3 496 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 AGMOQ6ZNB7 445 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 PHC3Q8NDX5 983 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 PRDM11Q9NQV5 511 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 TPSG1Q9NRR2 321 aa8.53□□□□□ -1.04
MSH5-219ENST00000497269 ABCA3Q99758 1704 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.52□□□□□ -1.05
MSH5-219ENST00000497269 MEGF11A6BM72 1044 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 MSTNO14793 375 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 TRIM37O94972 964 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 RAB6AP20340 208 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 EVA1CP58658 441 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 HDLBPQ00341 1268 aaKnown RBP8.52□□□□□ -1.05
MSH5-219ENST00000497269 SOX4Q06945 474 aaPredicted RBP8.52□□□□□ -1.05
MSH5-219ENST00000497269 SMG8Q8ND04 991 aaKnown RBP8.52□□□□□ -1.05
MSH5-219ENST00000497269 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 TMEM74Q96NL1 305 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 KRT82Q9NSB4 513 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 ADGRB1O14514 1584 aa8.52□□□□□ -1.05
MSH5-219ENST00000497269 KIAA0232Q92628 1395 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 TMPRSS2O15393 492 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 SLFN14P0C7P3 912 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 RLBP1P12271 317 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 USP11P51784 963 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
MSH5-219ENST00000497269 R3HDM1Q15032 1099 aaKnown RBP8.51□□□□□ -1.05
MSH5-219ENST00000497269 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
MSH5-219ENST00000497269 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 USP48Q86UV5 1035 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 C12orf40Q86WS4 652 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 KCNF1Q9H3M0 494 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 LGR6Q9HBX8 967 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
MSH5-219ENST00000497269 ACEP12821 1306 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
MSH5-219ENST00000497269 PRAMEF27A3QJZ7 478 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 TIAF1O95411 115 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 PROCP04070 461 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 RPS26P62854 115 aaKnown RBP8.5□□□□□ -1.05
MSH5-219ENST00000497269 HNRNPUQ00839 825 aaKnown RBP eCLIP8.5□□□□□ -1.05
MSH5-219ENST00000497269 ID3Q02535 119 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 BNC2Q6ZN30 1099 aaPredicted RBP8.5□□□□□ -1.05
MSH5-219ENST00000497269 Q6ZS46 218 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 ANKARQ7Z5J8 1434 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 C2CD4AQ8NCU7 369 aaPredicted RBP8.5□□□□□ -1.05
MSH5-219ENST00000497269 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
MSH5-219ENST00000497269 DLC1Q96QB1 1528 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
MSH5-219ENST00000497269 BMP3P12645 472 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 HCLS1P14317 486 aaPredicted RBP8.49□□□□□ -1.05
MSH5-219ENST00000497269 ASPAP45381 313 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 PWP1Q13610 501 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 INPP5AQ14642 412 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms