RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 PLEKHH3Q7Z736 793 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 CHD1LQ86WJ1 897 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 CLEC10AQ8IUN9 316 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 SMC5Q8IY18 1101 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
SF1-219ENST00000496969 IFNL3Q8IZI9 196 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
SF1-219ENST00000496969 VCPKMTQ9H867 229 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
SF1-219ENST00000496969 STAP2Q9UGK3 403 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 IVNS1ABPQ9Y6Y0 642 aa10.04□□□□□ -0.8
SF1-219ENST00000496969 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
SF1-219ENST00000496969 FLOT1O75955 427 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 EEF2P13639 858 aaKnown RBP10.03□□□□□ -0.8
SF1-219ENST00000496969 ZKSCAN1P17029 563 aaPredicted RBP10.03□□□□□ -0.8
SF1-219ENST00000496969 CAPN2P17655 700 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 CYP2B6P20813 491 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 RGS2P41220 211 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 COG2Q14746 738 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 PRPF38BQ5VTL8 546 aaKnown RBP10.03□□□□□ -0.8
SF1-219ENST00000496969 LBX2Q6XYB7 198 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 TICAM2Q86XR7 235 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 RILPL2Q969X0 211 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 TXNRD2Q9NNW7 524 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 HELLSQ9NRZ9 838 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 HOXC10Q9NYD6 342 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 RBPJLQ9UBG7 517 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 MYH4Q9Y623 1939 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
SF1-219ENST00000496969 HTTP42858 3142 aa10.02□□□□□ -0.8
SF1-219ENST00000496969 GJB1P08034 283 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 RASA1P20936 1047 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 GJA8P48165 433 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 MFAP1P55081 439 aaKnown RBP10.02□□□□□ -0.81
SF1-219ENST00000496969 NUCB1Q02818 461 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 PPARAQ07869 468 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
SF1-219ENST00000496969 SPICE1Q8N0Z3 855 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 MB21D1Q8N884 522 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 APBA2Q99767 749 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 UNC93B1Q9H1C4 597 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 PORCNQ9H237 461 aa10.02□□□□□ -0.81
SF1-219ENST00000496969 SMIM22K7EJ46 135 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 PEX10O60683 326 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 CNMDO75829 334 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 IGHDP01880 384 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 PLS1Q14651 629 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 Q3C1V9 767 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 MCMDC2Q4G0Z9 681 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 CCDC129Q6ZRS4 1044 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 U2AF1L4Q8WU68 220 aaKnown RBP10.01□□□□□ -0.81
SF1-219ENST00000496969 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.01□□□□□ -0.81
SF1-219ENST00000496969 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
SF1-219ENST00000496969 BTBD7Q9P203 1132 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 CTDP1Q9Y5B0 961 aaPredicted RBP10.01□□□□□ -0.81
SF1-219ENST00000496969 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
SF1-219ENST00000496969 COL11A1P12107 1806 aaPredicted RBP10□□□□□ -0.81
SF1-219ENST00000496969 RLFQ13129 1914 aa10□□□□□ -0.81
SF1-219ENST00000496969 SLC15A5A6NIM6 579 aa10□□□□□ -0.81
SF1-219ENST00000496969 TSPY2A6NKD2 308 aa10□□□□□ -0.81
SF1-219ENST00000496969 HIP1O00291 1037 aa10□□□□□ -0.81
SF1-219ENST00000496969 PRDM1O75626 825 aa10□□□□□ -0.81
SF1-219ENST00000496969 FARP2O94887 1054 aaPredicted RBP10□□□□□ -0.81
SF1-219ENST00000496969 SGPL1O95470 568 aa10□□□□□ -0.81
SF1-219ENST00000496969 TFRCP02786 760 aaKnown RBP10□□□□□ -0.81
SF1-219ENST00000496969 XRCC5P13010 732 aaKnown RBP10□□□□□ -0.81
SF1-219ENST00000496969 PTPREP23469 700 aa10□□□□□ -0.81
SF1-219ENST00000496969 DSG3P32926 999 aa10□□□□□ -0.81
SF1-219ENST00000496969 MAP2K5Q13163 448 aa10□□□□□ -0.81
SF1-219ENST00000496969 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
SF1-219ENST00000496969 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
SF1-219ENST00000496969 SHCBP1Q8NEM2 672 aa10□□□□□ -0.81
SF1-219ENST00000496969 TRIB2Q92519 343 aa10□□□□□ -0.81
SF1-219ENST00000496969 SHISA4Q96DD7 197 aa10□□□□□ -0.81
SF1-219ENST00000496969 ATG4CQ96DT6 458 aa10□□□□□ -0.81
SF1-219ENST00000496969 DEFB118Q96PH6 123 aa10□□□□□ -0.81
SF1-219ENST00000496969 HTATIP2Q9BUP3 242 aa10□□□□□ -0.81
SF1-219ENST00000496969 SPATC1LQ9H0A9 340 aa10□□□□□ -0.81
SF1-219ENST00000496969 TOMM22Q9NS69 142 aa10□□□□□ -0.81
SF1-219ENST00000496969 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
SF1-219ENST00000496969 SLC5A4Q9NY91 659 aa10□□□□□ -0.81
SF1-219ENST00000496969 NYAP2Q9P242 653 aa10□□□□□ -0.81
SF1-219ENST00000496969 GJD2Q9UKL4 321 aa10□□□□□ -0.81
SF1-219ENST00000496969 ISY1Q9ULR0 285 aaKnown RBP10□□□□□ -0.81
SF1-219ENST00000496969 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
SF1-219ENST00000496969 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
SF1-219ENST00000496969 RPTORQ8N122 1335 aa10□□□□□ -0.81
SF1-219ENST00000496969 LAMA4Q16363 1823 aa10□□□□□ -0.81
SF1-219ENST00000496969 A0A0D9SFI3 127 aa9.99□□□□□ -0.81
SF1-219ENST00000496969 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
SF1-219ENST00000496969 SLC25A27O95847 323 aa9.99□□□□□ -0.81
SF1-219ENST00000496969 TTLL1O95922 423 aa9.99□□□□□ -0.81
SF1-219ENST00000496969 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
SF1-219ENST00000496969 COPB2P35606 906 aa9.99□□□□□ -0.81
SF1-219ENST00000496969 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms