RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 DHX58Q96C10 678 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 SLFN14P0C7P3 912 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 NLRP5P59047 1200 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 ANKRD7Q92527 254 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
CALD1-222ENST00000495522 EPSTI1Q96J88 318 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 KAT14Q9H8E8 782 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
CALD1-222ENST00000495522 XDHP47989 1333 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
CALD1-222ENST00000495522 ZNF174Q15697 407 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 NFE2L3Q9Y4A8 694 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 ROBO3Q96MS0 1386 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 A0A087X0B3 334 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 WNT7AO00755 349 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
CALD1-222ENST00000495522 PLCD1P51178 756 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 ATP2C1P98194 919 aaPredicted RBP17.49■□□□□ 0.39
CALD1-222ENST00000495522 TFAP4Q01664 338 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 NFIXQ14938 502 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
CALD1-222ENST00000495522 CT47A1Q5JQC4 288 aaPredicted RBP17.49■□□□□ 0.39
CALD1-222ENST00000495522 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
CALD1-222ENST00000495522 BAG3O95817 575 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 ZNF18P17022 549 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
CALD1-222ENST00000495522 CCDC178Q5BJE1 867 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 KIF18AQ8NI77 898 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
CALD1-222ENST00000495522 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
CALD1-222ENST00000495522 CCP110O43303 1012 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 CALML3P27482 149 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 PTGDRQ13258 359 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
CALD1-222ENST00000495522 PAGE5Q96GU1 130 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
CALD1-222ENST00000495522 LDHCP07864 332 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
CALD1-222ENST00000495522 PPP4CP60510 307 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 IL17RBQ9NRM6 502 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
CALD1-222ENST00000495522 VWA3AA6NCI4 1184 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 SH3GLB2Q9NR46 395 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 TUBB4AP04350 444 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 AFMP43652 599 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 NCBP1Q09161 790 aaKnown RBP17.46■□□□□ 0.39
CALD1-222ENST00000495522 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 SLC51AQ86UW1 340 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.39
CALD1-222ENST00000495522 DYNLL2Q96FJ2 89 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
CALD1-222ENST00000495522 NAV1Q8NEY1 1877 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 ADRA2BP18089 450 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 GNAQP50148 359 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 GRM4Q14833 912 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 HSP90AA4PQ58FG1 418 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
CALD1-222ENST00000495522 GSDMAQ96QA5 445 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 ARID3AQ99856 593 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 PYM1Q9BRP8 204 aaKnown RBP17.45■□□□□ 0.38
CALD1-222ENST00000495522 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
CALD1-222ENST00000495522 TCP11L1Q9NUJ3 509 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
CALD1-222ENST00000495522 DPYDQ12882 1025 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 GRIK5Q16478 980 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
CALD1-222ENST00000495522 TSPY3P0CV98 308 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 TSPY8P0CW00 308 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
CALD1-222ENST00000495522 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 BLIDQ8IZY5 108 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 MED15Q96RN5 788 aa17.44■□□□□ 0.38
CALD1-222ENST00000495522 BAZ2BQ9UIF8 2168 aaKnown RBP17.44■□□□□ 0.38
CALD1-222ENST00000495522 MCM7P33993 719 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
CALD1-222ENST00000495522 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 GPSM2P81274 684 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 ARL6IP4Q66PJ3 421 aaKnown RBP17.43■□□□□ 0.38
CALD1-222ENST00000495522 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 STAG2Q8N3U4 1231 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms