RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 CAGE1Q8TC20 777 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 ZNF483Q8TF39 744 aaPredicted RBP11.38□□□□□ -0.59
LINC00488-201ENST00000494582 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 COPRSQ9NQ92 184 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 PAG1Q9NWQ8 432 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 EHD2Q9NZN4 543 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 KIF3CO14782 793 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
LINC00488-201ENST00000494582 AFMP43652 599 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 SNCBQ16143 134 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 CCDC122Q5T0U0 273 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 WDR59Q6PJI9 974 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 TRIML1Q8N9V2 468 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 OSBPL7Q9BZF2 842 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 TAB2Q9NYJ8 693 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 MST1RQ04912 1400 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
LINC00488-201ENST00000494582 TSPOAP1O95153 1857 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 PTPREP23469 700 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 CREG2Q8IUH2 290 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 MYO5AQ9Y4I1 1855 aaKnown RBP11.37□□□□□ -0.59
LINC00488-201ENST00000494582 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
LINC00488-201ENST00000494582 OPA1O60313 960 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 ERCC3P19447 782 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 KDM7AQ6ZMT4 941 aa11.37□□□□□ -0.59
LINC00488-201ENST00000494582 SPATS2Q86XZ4 545 aaKnown RBP11.37□□□□□ -0.59
LINC00488-201ENST00000494582 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 KLHL33A6NCF5 533 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 N4BP3O15049 544 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 PPP1R37O75864 691 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 IRX1P78414 480 aaPredicted RBP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 CKAP4Q07065 602 aaKnown RBP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 NAA25Q14CX7 972 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 MPRIPQ6WCQ1 1025 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 FMNL3Q8IVF7 1028 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 PIK3R5Q8WYR1 880 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 CCDC114Q96M63 670 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 HAUS4Q9H6D7 363 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 FAM153AQ9UHL3 310 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 CTNND2Q9UQB3 1225 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
LINC00488-201ENST00000494582 FGAP02671 866 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 TIMM10P62072 90 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 PDIA6Q15084 440 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 MMGT1Q8N4V1 131 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 MYL10Q9BUA6 226 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
LINC00488-201ENST00000494582 BACH1O14867 736 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 GUCY1A2P33402 732 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 SARNPP82979 210 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 GCKRQ14397 625 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 QPCTQ16769 361 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 HAUS3Q68CZ6 603 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 MICALCLQ6ZW33 695 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 STAMQ92783 540 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 TATDN2Q93075 761 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CSRNP2Q9H175 543 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 KIF9Q9HAQ2 790 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 SLIT1O75093 1534 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 ZSCAN5CA6NGD5 496 aaPredicted RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 RNF113AO15541 343 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 HSF2BPO75031 334 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 BYSLQ13895 437 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 NTRK3Q16288 839 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CYB5R4Q7L1T6 521 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 IQCKQ8N0W5 287 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 EPSTI1Q96J88 318 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 NEUROD6Q96NK8 337 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
LINC00488-201ENST00000494582 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 CPDO75976 1380 aa11.35□□□□□ -0.59
LINC00488-201ENST00000494582 BCL9LQ86UU0 1499 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms