RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 FLOT1O75955 427 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 CYP2D6P10635 497 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 ADORA2AP29274 412 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 EVX2Q03828 476 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 GJC2Q5T442 439 aaPredicted RBP11.64□□□□□ -0.55
UBR4-216ENST00000494503 LCORLQ8N3X6 602 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 SLC44A5Q8NCS7 719 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
UBR4-216ENST00000494503 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
UBR4-216ENST00000494503 MYH7P12883 1935 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 KBTBD13C9JR72 458 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 MBD4O95243 580 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 COL6A1P12109 1028 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 ICA1Q05084 483 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 GRB14Q14449 540 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 COG2Q14746 738 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 CLEC10AQ8IUN9 316 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 DYNLL2Q96FJ2 89 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
UBR4-216ENST00000494503 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 CUL9Q8IWT3 2517 aa11.63□□□□□ -0.55
UBR4-216ENST00000494503 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 ERCC3P19447 782 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 LRIT3Q3SXY7 679 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
UBR4-216ENST00000494503 TMEM179Q6ZVK1 233 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 LPAR1Q92633 364 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.62□□□□□ -0.557e-13■■□□□ 14.2
UBR4-216ENST00000494503 SPATC1LQ9H0A9 340 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 DCP1AQ9NPI6 582 aaPredicted RBP11.62□□□□□ -0.55
UBR4-216ENST00000494503 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
UBR4-216ENST00000494503 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
UBR4-216ENST00000494503 ZNFX1Q9P2E3 1918 aaKnown RBP11.62□□□□□ -0.55
UBR4-216ENST00000494503 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 DNM1LO00429 736 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 PRKAB2O43741 272 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 MS4A1P11836 297 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 AKR1B1P15121 316 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 RTP1P59025 263 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 LBX2Q6XYB7 198 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 ARRDC4Q8NCT1 418 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 ATG4CQ96DT6 458 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 COG6Q9Y2V7 657 aa11.61□□□□□ -0.55
UBR4-216ENST00000494503 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 STRNO43815 780 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 CYBAP13498 195 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 GABPAQ06546 454 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 MIER1Q8N108 512 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 TRPV1Q8NER1 839 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 FERMT2Q96AC1 680 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
UBR4-216ENST00000494503 PLXNA1Q9UIW2 1896 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 SMCHD1A6NHR9 2005 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 ZNF236Q9UL36 1845 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 HOXC6P09630 235 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 FCER1AP12319 257 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 KIAA1755Q5JYT7 1200 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 MMP19Q99542 508 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 MROH8Q9H579 483 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
UBR4-216ENST00000494503 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
UBR4-216ENST00000494503 RLFQ13129 1914 aa11.58□□□□□ -0.55
UBR4-216ENST00000494503 PARP14Q460N5 1801 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 A0A0C4DFX4 3053 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 TCRBV5S4A2TA0A5A2 114 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 USP17L21D6R901 530 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
UBR4-216ENST00000494503 SEPT4O43236 478 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 COBLO75128 1261 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 DSG3P32926 999 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 ADD2P35612 726 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 ADCYAP1R1P41586 468 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 CDK8P49336 464 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 KCTD2Q14681 263 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 TRIM60Q495X7 471 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 ZNF697Q5TEC3 545 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 OLFML2BQ68BL8 750 aa11.58□□□□□ -0.56
UBR4-216ENST00000494503 RPAP2Q8IXW5 612 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms