RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
NPHP3-209ENST00000493732 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 ATP2B4P23634 1241 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 KLRK1P26718 216 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 LONP1P36776 959 aaKnown RBP10.98□□□□□ -0.65
NPHP3-209ENST00000493732 SPECC1Q5M775 1068 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 SH3RF1Q7Z6J0 888 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF444Q8N0Y2 327 aaPredicted RBP10.98□□□□□ -0.65
NPHP3-209ENST00000493732 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 TAF1P21675 1872 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF18P17022 549 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 TFAP4Q01664 338 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 SPATA1Q5VX52 437 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 SPECC1LQ69YQ0 1117 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 PDILTQ8N807 584 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 CCDC12Q8WUD4 166 aaPredicted RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 RPGRQ92834 1020 aaKnown RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 RMND1Q9NWS8 449 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 CGNQ9P2M7 1197 aaKnown RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 LAD1O00515 517 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 STX10O60499 249 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 BMP6P22004 513 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 KCNQ4P56696 695 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 ST5P78524 1137 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 GRIN1Q05586 938 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 PTGDRQ13258 359 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 GRM4Q14833 912 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 FILIP1LQ4L180 1135 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 SYMPKQ92797 1274 aaKnown RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 DHX58Q96C10 678 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 PAGE5Q96GU1 130 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 ERO1AQ96HE7 468 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
NPHP3-209ENST00000493732 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
NPHP3-209ENST00000493732 FOXN1O15353 648 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 BBOX1O75936 387 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 MYL1P05976 194 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 SMARCA1P28370 1054 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF174Q15697 407 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 NPY5RQ15761 445 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 BLIDQ8IZY5 108 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 DAGLBQ8NCG7 672 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 PPP1R13BQ96KQ4 1090 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 FEZ1Q99689 392 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.65
NPHP3-209ENST00000493732 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
NPHP3-209ENST00000493732 LY75O60449 1722 aa10.96□□□□□ -0.65
NPHP3-209ENST00000493732 USP27XA6NNY8 438 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 SLU7O95391 586 aaKnown RBP10.96□□□□□ -0.66
NPHP3-209ENST00000493732 PRR29P0C7W0 189 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 SPAG1Q07617 926 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 DPYDQ12882 1025 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 TBX2Q13207 712 aaPredicted RBP10.96□□□□□ -0.66
NPHP3-209ENST00000493732 NFIXQ14938 502 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 PIK3AP1Q6ZUJ8 805 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 TXNRD3Q86VQ6 643 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 ANKRD20A12PQ8NF67 263 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 EPSTI1Q96J88 318 aa10.96□□□□□ -0.66
NPHP3-209ENST00000493732 SRRTQ9BXP5 876 aaKnown RBP10.96□□□□□ -0.66
NPHP3-209ENST00000493732 PHLPP2Q6ZVD8 1323 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 CCDC194A0A1B0GVG4 234 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 VWA3AA6NCI4 1184 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
NPHP3-209ENST00000493732 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 CYP2D6P10635 497 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 ETF1P62495 437 aaKnown RBP10.95□□□□□ -0.66
NPHP3-209ENST00000493732 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
NPHP3-209ENST00000493732 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
NPHP3-209ENST00000493732 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 TAF1LQ8IZX4 1826 aa10.95□□□□□ -0.66
NPHP3-209ENST00000493732 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 GPR75-ASB3A0A0A6YYF3 556 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 A0A1B0GTH6 734 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 SMIM22K7EJ46 135 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 NMT2O60551 498 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 TPM1P09493 284 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 IL1R1P14778 569 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 NR1I3Q14994 352 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 EARS2Q5JPH6 523 aaKnown RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 FAM196AQ6ZSG2 479 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms