RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RAD21O60216 631 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 ZNF445P59923 1031 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 KRT85P78386 507 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-206ENST00000493553 SART3Q15020 963 aaKnown RBP11.74□□□□□ -0.53
PRPF3-206ENST00000493553 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 FBXO33Q7Z6M2 555 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-206ENST00000493553 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
PRPF3-206ENST00000493553 NAPBQ9H115 298 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 H3BQV1 296 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 BBOX1O75936 387 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 GNRH1P01148 92 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 HIBADHP31937 336 aaKnown RBP11.73□□□□□ -0.53
PRPF3-206ENST00000493553 RCAN1P53805 252 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 UBE2HP62256 183 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 GRAPQ13588 217 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 PKP1Q13835 747 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
PRPF3-206ENST00000493553 MAGEB6Q8N7X4 407 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
PRPF3-206ENST00000493553 GRAPLQ8TC17 118 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-206ENST00000493553 LY75O60449 1722 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 ELP1O95163 1332 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 PRC1O43663 620 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 USP4Q13107 963 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 SYNE3Q6ZMZ3 975 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 MB21D2Q8IYB1 491 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 RBM17Q96I25 401 aaKnown RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
PRPF3-206ENST00000493553 CFAP45Q9UL16 551 aa11.72□□□□□ -0.53
PRPF3-206ENST00000493553 XDHP47989 1333 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 CPLX1O14810 134 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 PLSCR1O15162 318 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 MBD4O95243 580 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 LARGE1O95461 756 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
PRPF3-206ENST00000493553 LIFRP42702 1097 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 GSTO1P78417 241 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 NFIXQ14938 502 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 PI16Q6UXB8 463 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 ZNF804AQ7Z570 1209 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 IFNL3Q8IZI9 196 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.53
PRPF3-206ENST00000493553 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-206ENST00000493553 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
PRPF3-206ENST00000493553 ANGEL1Q9UNK9 670 aaKnown RBP11.71□□□□□ -0.53
PRPF3-206ENST00000493553 COL24A1Q17RW2 1714 aa11.71□□□□□ -0.54
PRPF3-206ENST00000493553 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 SALL1Q9NSC2 1324 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 C4BP0C0L5 1744 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 ERICH2A1L162 156 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 GOLGA6L4A6NEF3 574 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 LDHCP07864 332 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 CYP7A1P22680 504 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 PDIA3P30101 505 aaKnown RBP11.7□□□□□ -0.54
PRPF3-206ENST00000493553 TDO2P48775 406 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 MAP7D1Q3KQU3 841 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 WASF1Q92558 559 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
PRPF3-206ENST00000493553 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 ALG2Q9H553 416 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 ANAPC4Q9UJX5 808 aa11.7□□□□□ -0.54
PRPF3-206ENST00000493553 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-206ENST00000493553 CRY2Q49AN0 593 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
PRPF3-206ENST00000493553 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 STAG1Q8WVM7 1258 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 CELF1Q92879 486 aaKnown RBP11.69□□□□□ -0.54
PRPF3-206ENST00000493553 CRAMP1Q96RY5 1269 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
PRPF3-206ENST00000493553 GRIP2Q9C0E4 1043 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-206ENST00000493553 GRPEL1Q9HAV7 217 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 TAF6LQ9Y6J9 622 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
PRPF3-206ENST00000493553 MYH7P12883 1935 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 GSG1L2A8MUP6 293 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 FOXP2O15409 715 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 GYS1P13807 737 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms