RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
TTC28-207ENST00000490475 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 LCORLQ8N3X6 602 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 SHCBP1Q8NEM2 672 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
TTC28-207ENST00000490475 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
TTC28-207ENST00000490475 SPDYE16A6NNV3 312 aaPredicted RBP12.43□□□□□ -0.42
TTC28-207ENST00000490475 MBD4O95243 580 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 ICA1Q05084 483 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
TTC28-207ENST00000490475 GRB14Q14449 540 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 TSHZ3Q63HK5 1081 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 ACER1Q8TDN7 264 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 OTUD7AQ8TE49 926 aaPredicted RBP12.43□□□□□ -0.42
TTC28-207ENST00000490475 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 PRO3102Q9H379 93 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
TTC28-207ENST00000490475 TMX2Q9Y320 296 aa12.43□□□□□ -0.42
TTC28-207ENST00000490475 WDR46O15213 610 aaKnown RBP12.42□□□□□ -0.42
TTC28-207ENST00000490475 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
TTC28-207ENST00000490475 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 BMP8BP34820 402 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 COPB2P35606 906 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 C12orf60Q5U649 245 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 B4GALNT3Q6L9W6 998 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 MROH8Q9H579 483 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 KANSL2Q9H9L4 492 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
TTC28-207ENST00000490475 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 BAZ2AQ9UIF9 1905 aaKnown RBP12.41□□□□□ -0.42
TTC28-207ENST00000490475 CNMDO75829 334 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 SLC25A27O95847 323 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 GNAT2P19087 354 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 TRIM32Q13049 653 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 OLFML2BQ68BL8 750 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 C16orf86Q6ZW13 317 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 VCPKMTQ9H867 229 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 SLC4A4Q9Y6R1 1079 aa12.41□□□□□ -0.42
TTC28-207ENST00000490475 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 USP17L21D6R901 530 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 FLOT1O75955 427 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 DSG3P32926 999 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 CDK8P49336 464 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
TTC28-207ENST00000490475 BTBD7Q9P203 1132 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
TTC28-207ENST00000490475 ALPK3Q96L96 1907 aa12.4□□□□□ -0.42
TTC28-207ENST00000490475 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
TTC28-207ENST00000490475 A0A1W2PRG0 241 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 ERC2O15083 957 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 COL6A1P12109 1028 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 CCL14Q16627 93 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 LHX8Q68G74 356 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 GDF15Q99988 308 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
TTC28-207ENST00000490475 DDX20Q9UHI6 824 aaKnown RBP12.39□□□□□ -0.43
TTC28-207ENST00000490475 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
TTC28-207ENST00000490475 A0A0G2JMZ2 1700 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 PRKAB2O43741 272 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 PEX10O60683 326 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 CHGBP05060 677 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 FCER1AP12319 257 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 AKR1B1P15121 316 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 ERCC3P19447 782 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 ADORA2AP29274 412 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 CNGA1P29973 690 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 CCND3P30281 292 aaPredicted RBP12.38□□□□□ -0.43
TTC28-207ENST00000490475 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
TTC28-207ENST00000490475 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 APPBP2Q92624 585 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 SYNPO2Q9UMS6 1093 aa12.38□□□□□ -0.43
TTC28-207ENST00000490475 TTC41PQ6P2S7 1318 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 RLFQ13129 1914 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 DNM1LO00429 736 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 CYP2D6P10635 497 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 MX1P20591 662 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 NUCB1Q02818 461 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 PLS1Q14651 629 aa12.37□□□□□ -0.43
TTC28-207ENST00000490475 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms