RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 ARHGEF10LQ9HCE6 1279 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 ATP8A2Q9NTI2 1148 aa21.45■■□□□ 1.02
YIPF3-208ENST00000490447 A0A1W2PRG0 241 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 MSCO60682 206 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 CYP2D6P10635 497 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 COL6A1P12109 1028 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 ATP5JP18859 108 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 ADD2P35612 726 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 DPP9Q86TI2 863 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 SLC44A5Q8NCS7 719 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 FLRT1Q9NZU1 646 aa21.44■■□□□ 1.02
YIPF3-208ENST00000490447 SOX1O00570 391 aaPredicted RBP21.43■■□□□ 1.02
YIPF3-208ENST00000490447 HOXC6P09630 235 aa21.43■■□□□ 1.02
YIPF3-208ENST00000490447 ICA1Q05084 483 aa21.43■■□□□ 1.02
YIPF3-208ENST00000490447 LPAR1Q92633 364 aa21.43■■□□□ 1.02
YIPF3-208ENST00000490447 DYNLL2Q96FJ2 89 aa21.43■■□□□ 1.02
YIPF3-208ENST00000490447 LRCH3Q96II8 777 aa21.43■■□□□ 1.02
YIPF3-208ENST00000490447 DDX20Q9UHI6 824 aaKnown RBP21.43■■□□□ 1.02
YIPF3-208ENST00000490447 PRKAB2O43741 272 aa21.42■■□□□ 1.02
YIPF3-208ENST00000490447 STRNO43815 780 aa21.42■■□□□ 1.02
YIPF3-208ENST00000490447 MAGEA10P43363 369 aaPredicted RBP21.42■■□□□ 1.02
YIPF3-208ENST00000490447 MB21D1Q8N884 522 aa21.42■■□□□ 1.02
YIPF3-208ENST00000490447 HAUS7Q99871 368 aa21.42■■□□□ 1.02
YIPF3-208ENST00000490447 MOV10L1Q9BXT6 1211 aaKnown RBP21.42■■□□□ 1.02
YIPF3-208ENST00000490447 SPATC1LQ9H0A9 340 aa21.42■■□□□ 1.02
YIPF3-208ENST00000490447 FLOT1O75955 427 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 ADORA2AP29274 412 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 CYP2C19P33261 490 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 PLS1Q14651 629 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 ZSCAN25Q6NSZ9 544 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 NPLOC4Q8TAT6 608 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 CCDC17Q96LX7 622 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 UBE2OQ9C0C9 1292 aaKnown RBP21.41■■□□□ 1.02
YIPF3-208ENST00000490447 SLC5A4Q9NY91 659 aa21.41■■□□□ 1.02
YIPF3-208ENST00000490447 AKR1B1P15121 316 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 LRRC26Q2I0M4 334 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 SLFNL1Q499Z3 407 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 TDHQ8IZJ6 230 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 SHCBP1Q8NEM2 672 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 LRRCC1Q9C099 1032 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 SENP6Q9GZR1 1112 aaPredicted RBP21.4■■□□□ 1.02
YIPF3-208ENST00000490447 VCPKMTQ9H867 229 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
YIPF3-208ENST00000490447 ERCC3P19447 782 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 SAMD1Q6SPF0 538 aaPredicted RBP21.39■■□□□ 1.01
YIPF3-208ENST00000490447 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 CLEC10AQ8IUN9 316 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 MROH8Q9H579 483 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 TMX2Q9Y320 296 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 SLC4A4Q9Y6R1 1079 aa21.39■■□□□ 1.01
YIPF3-208ENST00000490447 USP17L12C9JPN9 530 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 USP17L21D6R901 530 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 WDR46O15213 610 aaKnown RBP21.38■■□□□ 1.01
YIPF3-208ENST00000490447 DSG3P32926 999 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 CDK8P49336 464 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 C12orf60Q5U649 245 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 OLFML2BQ68BL8 750 aa21.38■■□□□ 1.01
YIPF3-208ENST00000490447 DNAH12Q6ZR08 3092 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 CYP2D7A0A087X1C5 515 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 DNM1LO00429 736 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 CYBAP13498 195 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 KIAA1755Q5JYT7 1200 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 C16orf86Q6ZW13 317 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
YIPF3-208ENST00000490447 LRIT3Q3SXY7 679 aa21.36■■□□□ 1.01
YIPF3-208ENST00000490447 GPR153Q6NV75 609 aa21.36■■□□□ 1.01
YIPF3-208ENST00000490447 GOPCQ9HD26 462 aa21.36■■□□□ 1.01
YIPF3-208ENST00000490447 RAD21O60216 631 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 MDM2Q00987 491 aaPredicted RBP21.35■■□□□ 1.01
YIPF3-208ENST00000490447 ABRAQ8N0Z2 381 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 ARRDC4Q8NCT1 418 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 KANSL2Q9H9L4 492 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
YIPF3-208ENST00000490447 PRKAG2Q9UGJ0 569 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 A0A0G2JMZ2 1700 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
YIPF3-208ENST00000490447 MYH8P13535 1937 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 KBTBD13C9JR72 458 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 CHGBP05060 677 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 FCER1AP12319 257 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 EEF2P13639 858 aaKnown RBP21.34■■□□□ 1.01
YIPF3-208ENST00000490447 ATN1P54259 1190 aaPredicted RBP21.34■■□□□ 1.01
YIPF3-208ENST00000490447 CTR9Q6PD62 1173 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 SIAH1Q8IUQ4 282 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 TRPV1Q8NER1 839 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 GPATCH3Q96I76 525 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
YIPF3-208ENST00000490447 PUS7LQ9H0K6 701 aaKnown RBP21.34■■□□□ 1.01
YIPF3-208ENST00000490447 COL6A3P12111 3177 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 FRMPD3Q5JV73 1810 aa21.34■■□□□ 1.01
YIPF3-208ENST00000490447 SMARCA5O60264 1052 aaPredicted RBP21.33■■□□□ 1.01
YIPF3-208ENST00000490447 COBLO75128 1261 aa21.33■■□□□ 1.01
YIPF3-208ENST00000490447 SLC25A27O95847 323 aa21.33■■□□□ 1.01
YIPF3-208ENST00000490447 MYCNP04198 464 aaPredicted RBP21.33■■□□□ 1.01
YIPF3-208ENST00000490447 GJC2Q5T442 439 aaPredicted RBP21.33■■□□□ 1.01
YIPF3-208ENST00000490447 ECHDC1Q9NTX5 307 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms