RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 EYA1Q99502 592 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 RNF14Q9UBS8 474 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 MYOM2P54296 1465 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 LUC7L3O95232 432 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 CABS1Q96KC9 395 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 PSMD1Q99460 953 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 THEGQ9P2T0 379 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 LRWD1Q9UFC0 647 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 ASIC3Q9UHC3 531 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 MED23Q9ULK4 1368 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 EFCAB8A8MWE9 144 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 MAGEA1P43355 309 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 HADHQ16836 314 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 ATP7BP35670 1465 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 SLC8A1P32418 973 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 SLC12A2P55011 1212 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 BPIFB4P59827 614 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF174Q15697 407 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 HAUS7Q99871 368 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 PPFIA2O75334 1257 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 HSPA1LP34931 641 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 PHLDB3Q6NSJ2 640 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 KRBA2Q6ZNG9 492 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 LARSQ9P2J5 1176 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 SNX14Q9Y5W7 946 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 IVNS1ABPQ9Y6Y0 642 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 CCDC169A6NNP5 214 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 SEMA3EO15041 775 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 ATF7P17544 494 aaPredicted RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 MCF2L2Q86YR7 1114 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 TRIM42Q8IWZ5 723 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 CEP120Q8N960 986 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 DDAH1O94760 285 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 DIS3L2Q8IYB7 885 aaKnown RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 NELFBQ8WX92 580 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 RIOK1Q9BRS2 568 aaKnown RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 KDRP35968 1356 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 PZPP20742 1482 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 ATP2C2O75185 946 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 GCNT3O95395 438 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF853P0CG23 659 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 TSC1Q92574 1164 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 VSIG1Q86XK7 387 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 PPP1R12CQ9BZL4 782 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 HAUS4Q9H6D7 363 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 LCMT1Q9UIC8 334 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 GCKRQ14397 625 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 HERC4Q5GLZ8 1057 aaPredicted RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 UTP14CQ5TAP6 766 aaKnown RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 TMC4Q7Z404 712 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 MIGA1Q8NAN2 632 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 VPS16Q9H269 839 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 GJC1P36383 396 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 EIF6P56537 245 aaKnown RBP9.76□□□□□ -0.85
LSAMP-205ENST00000490035 AKNAD1Q5T1N1 836 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 SPC25Q9HBM1 224 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 CBX8Q9HC52 389 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 NFE2L3Q9Y4A8 694 aa9.76□□□□□ -0.85
LSAMP-205ENST00000490035 EIF3DO15371 548 aaKnown RBP eCLIP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 SEPT2Q15019 361 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 PIK3AP1Q6ZUJ8 805 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 JPH2Q9BR39 696 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 PLEKHG1Q9ULL1 1385 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 B4E1Z4 1266 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 STMN1P16949 149 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 MAP3K19Q56UN5 1328 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 RNF34Q969K3 372 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 TUBB6Q9BUF5 446 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 ZMYM6O95789 1325 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 IL13P35225 146 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 PPP1R21Q6ZMI0 780 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 MYCT1Q8N699 235 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 POLR1AO95602 1720 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 ARHGEF37A1IGU5 675 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 NR1I2O75469 434 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 CTTNBP2NLQ9P2B4 639 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 HYOU1Q9Y4L1 999 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 CHRNA2Q15822 529 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 CWF19L2Q2TBE0 894 aaKnown RBP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 LAMC1P11047 1609 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 H0YIN7 160 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 EXOC3O60645 756 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms