RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MCM9Q9NXL9 1143 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 MGAMO43451 1857 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 A0A0G2JLL6 359 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 PDHXO00330 501 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 ERC2O15083 957 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 RNF113AO15541 343 aaKnown RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 SHMT1P34896 483 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 GABPAQ06546 454 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 SPP2Q13103 211 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 ZSCAN25Q6NSZ9 544 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 CHD1LQ86WJ1 897 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 TTC13Q8NBP0 860 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 APPBP2Q92624 585 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 STRBPQ96SI9 672 aaKnown RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 SEC62Q99442 399 aaKnown RBP8.62□□□□□ -1.03
UBE4B-209ENST00000487244 FSD1Q9BTV5 496 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 EHD4Q9H223 541 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 ZBTB21Q9ULJ3 1066 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 SLC4A4Q9Y6R1 1079 aa8.62□□□□□ -1.03
UBE4B-209ENST00000487244 DOCK3Q8IZD9 2030 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 GREB1LQ9C091 1923 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-209ENST00000487244 CXCL11O14625 94 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 GPAA1O43292 621 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 FKTNO75072 461 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 GH2P01242 217 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-209ENST00000487244 CYP2C8P10632 490 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 HMGCS2P54868 508 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 MTMR2Q13614 643 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 NOM1Q5C9Z4 860 aaKnown RBP8.61□□□□□ -1.03
UBE4B-209ENST00000487244 TREML2Q5T2D2 321 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 TATDN1Q6P1N9 297 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 GADL1Q6ZQY3 521 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 CCDC129Q6ZRS4 1044 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 CTU1Q7Z7A3 348 aaKnown RBP8.61□□□□□ -1.03
UBE4B-209ENST00000487244 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 TTC6Q86TZ1 520 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 CD99L2Q8TCZ2 262 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 ARHGAP39Q9C0H5 1083 aa8.61□□□□□ -1.03
UBE4B-209ENST00000487244 EPB41L4AQ9HCS5 686 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-209ENST00000487244 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 USP17L21D6R901 530 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 FOXP2O15409 715 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 TLR2O60603 784 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ZFYP08048 801 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ASNSP08243 561 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 GUCY1A2P33402 732 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 HIC1Q14526 733 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 CTR9Q6PD62 1173 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 CLEC10AQ8IUN9 316 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
UBE4B-209ENST00000487244 ATP8A2Q9NTI2 1148 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 CPA4Q9UI42 421 aa8.6□□□□□ -1.03
UBE4B-209ENST00000487244 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 RLFQ13129 1914 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 MYH4Q9Y623 1939 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 A0A0D9SFI3 127 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 CTGFP29279 349 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 SP3Q02447 781 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 ZYXQ15942 572 aaKnown RBP8.59□□□□□ -1.03
UBE4B-209ENST00000487244 ABCB5Q2M3G0 1257 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 CERKLQ49MI3 558 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-209ENST00000487244 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 ACER1Q8TDN7 264 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 EVI5LQ96CN4 794 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 FAM227BQ96M60 508 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 WDR18Q9BV38 432 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-209ENST00000487244 AGTPBP1Q9UPW5 1226 aa8.59□□□□□ -1.03
UBE4B-209ENST00000487244 SOWAHBA6NEL2 793 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 PEX10O60683 326 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 AKR1B1P15121 316 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 CDK8P49336 464 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 BACE1P56817 501 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 SEPT2Q15019 361 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 VPS53Q5VIR6 699 aa8.58□□□□□ -1.04
UBE4B-209ENST00000487244 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms