RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 ATN1P54259 1190 aaPredicted RBP24.29■■□□□ 1.48
PHF1-208ENST00000486845 HSP90AB4PQ58FF6 505 aa24.29■■□□□ 1.48
PHF1-208ENST00000486845 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
PHF1-208ENST00000486845 ARRDC4Q8NCT1 418 aa24.29■■□□□ 1.48
PHF1-208ENST00000486845 SHCBP1Q8NEM2 672 aa24.29■■□□□ 1.48
PHF1-208ENST00000486845 DNAH12Q6ZR08 3092 aa24.29■■□□□ 1.48
PHF1-208ENST00000486845 A0A0G2JMZ2 1700 aa24.28■■□□□ 1.48
PHF1-208ENST00000486845 A0A1W2PRG0 241 aa24.28■■□□□ 1.48
PHF1-208ENST00000486845 RTP1P59025 263 aa24.28■■□□□ 1.48
PHF1-208ENST00000486845 FAM109BQ6ICB4 259 aaPredicted RBP24.28■■□□□ 1.48
PHF1-208ENST00000486845 MB21D1Q8N884 522 aa24.28■■□□□ 1.48
PHF1-208ENST00000486845 SPATC1LQ9H0A9 340 aa24.28■■□□□ 1.48
PHF1-208ENST00000486845 TMEM179Q6ZVK1 233 aa24.27■■□□□ 1.48
PHF1-208ENST00000486845 IL1RAPL2Q9NP60 686 aa24.27■■□□□ 1.48
PHF1-208ENST00000486845 SLC5A4Q9NY91 659 aa24.27■■□□□ 1.48
PHF1-208ENST00000486845 KBTBD13C9JR72 458 aa24.26■■□□□ 1.47
PHF1-208ENST00000486845 ERCC3P19447 782 aa24.26■■□□□ 1.47
PHF1-208ENST00000486845 GJC2Q5T442 439 aaPredicted RBP24.26■■□□□ 1.47
PHF1-208ENST00000486845 SWAP70Q9UH65 585 aa24.26■■□□□ 1.47
PHF1-208ENST00000486845 ZNF532Q9HCE3 1301 aa24.26■■□□□ 1.47
PHF1-208ENST00000486845 RLFQ13129 1914 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 POTEB2H3BUK9 544 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 EVX2Q03828 476 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 RHPN1Q8TCX5 695 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.25■■□□□ 1.47
PHF1-208ENST00000486845 MROH8Q9H579 483 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 DCP1AQ9NPI6 582 aaPredicted RBP24.25■■□□□ 1.47
PHF1-208ENST00000486845 ATP11BQ9Y2G3 1177 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 LTBP2Q14767 1821 aa24.25■■□□□ 1.47
PHF1-208ENST00000486845 SEPT4O43236 478 aa24.24■■□□□ 1.47
PHF1-208ENST00000486845 ABRAQ8N0Z2 381 aa24.24■■□□□ 1.47
PHF1-208ENST00000486845 CLASRPQ8N2M8 674 aaKnown RBP24.24■■□□□ 1.47
PHF1-208ENST00000486845 SDR42E1Q8WUS8 393 aa24.24■■□□□ 1.47
PHF1-208ENST00000486845 SH2D4AQ9H788 454 aa24.24■■□□□ 1.47
PHF1-208ENST00000486845 ARHGEF10LQ9HCE6 1279 aa24.24■■□□□ 1.47
PHF1-208ENST00000486845 MYH8P13535 1937 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 TCRBV5S4A2TA0A5A2 114 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 GOLIM4O00461 696 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 DSG3P32926 999 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 PLS1Q14651 629 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 SLC39A5Q6ZMH5 540 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 LCORLQ8N3X6 602 aa24.23■■□□□ 1.47
PHF1-208ENST00000486845 DNAJC2Q99543 621 aaKnown RBP24.23■■□□□ 1.47
PHF1-208ENST00000486845 COBLO75128 1261 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 FLOT1O75955 427 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 CYP2D6P10635 497 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 NCAPG2Q86XI2 1143 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 SLC44A5Q8NCS7 719 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 GUCD1Q96NT3 240 aa24.22■■□□□ 1.47
PHF1-208ENST00000486845 HNRNPUQ00839 825 aaKnown RBP eCLIP24.21■■□□□ 1.47
PHF1-208ENST00000486845 ICA1Q05084 483 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 KIAA1755Q5JYT7 1200 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 ANO1Q5XXA6 986 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 ATG4CQ96DT6 458 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 KIF1BPQ96EK5 621 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 TMX2Q9Y320 296 aa24.21■■□□□ 1.47
PHF1-208ENST00000486845 MYCNP04198 464 aaPredicted RBP24.2■■□□□ 1.46
PHF1-208ENST00000486845 IFIT2P09913 472 aaKnown RBP24.2■■□□□ 1.46
PHF1-208ENST00000486845 ZNF697Q5TEC3 545 aa24.2■■□□□ 1.46
PHF1-208ENST00000486845 DYNLL2Q96FJ2 89 aa24.2■■□□□ 1.46
PHF1-208ENST00000486845 VCPKMTQ9H867 229 aa24.2■■□□□ 1.46
PHF1-208ENST00000486845 ARMT1Q9H993 441 aa24.2■■□□□ 1.46
PHF1-208ENST00000486845 PRDM5Q9NQX1 630 aaPredicted RBP24.2■■□□□ 1.46
PHF1-208ENST00000486845 ATP8A2Q9NTI2 1148 aa24.2■■□□□ 1.46
PHF1-208ENST00000486845 WDR46O15213 610 aaKnown RBP24.19■■□□□ 1.46
PHF1-208ENST00000486845 FCER1AP12319 257 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 AKR1B1P15121 316 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 SNX17Q15036 470 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 SPICE1Q8N0Z3 855 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 MAML3Q96JK9 1138 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 CCDC17Q96LX7 622 aa24.19■■□□□ 1.46
PHF1-208ENST00000486845 APBB1O00213 710 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 SLC25A27O95847 323 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 LRRC41Q15345 812 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 TRIM60Q495X7 471 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 PRAMEF19Q5SWL8 479 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 CLEC10AQ8IUN9 316 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 SIAH1Q8IUQ4 282 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.18■■□□□ 1.46
PHF1-208ENST00000486845 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 FAM161BQ96MY7 647 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 NRBP1Q9UHY1 535 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 PARP14Q460N5 1801 aa24.18■■□□□ 1.46
PHF1-208ENST00000486845 LAMA2P24043 3122 aaKnown RBP24.18■■□□□ 1.46
PHF1-208ENST00000486845 MBD4O95243 580 aa24.17■■□□□ 1.46
PHF1-208ENST00000486845 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
PHF1-208ENST00000486845 SAMD1Q6SPF0 538 aaPredicted RBP24.17■■□□□ 1.46
PHF1-208ENST00000486845 PDLIM7Q9NR12 457 aa24.17■■□□□ 1.46
PHF1-208ENST00000486845 PAG1Q9NWQ8 432 aa24.17■■□□□ 1.46
PHF1-208ENST00000486845 BAZ2AQ9UIF9 1905 aaKnown RBP24.16■■□□□ 1.46
PHF1-208ENST00000486845 PRKAB2O43741 272 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 HMMRO75330 724 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 ADD2P35612 726 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 SHHQ15465 462 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 FAM47AQ5JRC9 791 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 C1orf53Q5VUE5 145 aa24.16■■□□□ 1.46
PHF1-208ENST00000486845 RPAP2Q8IXW5 612 aaPredicted RBP24.16■■□□□ 1.46
PHF1-208ENST00000486845 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.16■■□□□ 1.461e-8■■■□□ 17.2
PHF1-208ENST00000486845 UNC80Q8N2C7 3258 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms