RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 CACNA2D2Q9NY47 1150 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 AK5Q9Y6K8 562 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 EIF4G3O43432 1585 aaKnown RBP3.92□□□□□ -1.78
USH2A-204ENST00000481786 ADGRL1O94910 1474 aa3.92□□□□□ -1.78
USH2A-204ENST00000481786 OVOL3O00110 214 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 CHD1O14646 1710 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 PEX10O60683 326 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 SEMA7AO75326 666 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 FBXO24O75426 580 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 LRIG2O94898 1065 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 EIF4BP23588 611 aaKnown RBP3.91□□□□□ -1.78
USH2A-204ENST00000481786 EFEMP1Q12805 493 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 SLBPQ14493 270 aaKnown RBP eCLIP3.91□□□□□ -1.78
USH2A-204ENST00000481786 CCDC27Q2M243 656 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 RASIP1Q5U651 963 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 C22orf34Q6ZV56 151 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 CDC37L1Q7L3B6 337 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 THAP5Q7Z6K1 395 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 IRF2BP1Q8IU81 584 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 CREG2Q8IUH2 290 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 DACT3Q96B18 629 aaPredicted RBP3.91□□□□□ -1.78
USH2A-204ENST00000481786 EMILIN2Q9BXX0 1053 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 ZNF552Q9H707 407 aaPredicted RBP3.91□□□□□ -1.78
USH2A-204ENST00000481786 CBX8Q9HC52 389 aa3.91□□□□□ -1.78
USH2A-204ENST00000481786 SLC22A31A6NKX4 558 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 CELA3AP09093 270 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 EPHB3P54753 998 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 CRELD1Q96HD1 420 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 INTS4Q96HW7 963 aaKnown RBP3.9□□□□□ -1.79
USH2A-204ENST00000481786 BDH2Q9BUT1 245 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 PARP2Q9UGN5 583 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 EBF1Q9UH73 591 aa3.9□□□□□ -1.79
USH2A-204ENST00000481786 AQRO60306 1485 aaKnown RBP eCLIP3.9□□□□□ -1.79
USH2A-204ENST00000481786 SYNJ1O43426 1573 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 KDM6BO15054 1643 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 RFXAPO00287 272 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 FANCGO15287 622 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 PRICKLE3O43900 615 aaPredicted RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 EFEMP2O95967 443 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 ZGLP1P0C6A0 271 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 ERCC3P19447 782 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 PDE6BP35913 854 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 AFF3P51826 1226 aaKnown RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 DAB2P98082 770 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 TAGLNQ01995 201 aaKnown RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 PLP2Q04941 152 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 INPP5AQ14642 412 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 SPATS1Q496A3 300 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 SV2BQ7L1I2 683 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 XAGE3Q8WTP9 111 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 BORCS6Q96GS4 357 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 SLC6A17Q9H1V8 727 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 MBD1Q9UIS9 605 aaPredicted RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 TTF2Q9UNY4 1162 aaKnown RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 YBX2Q9Y2T7 364 aaKnown RBP3.89□□□□□ -1.79
USH2A-204ENST00000481786 SAMM50Q9Y512 469 aa3.89□□□□□ -1.79
USH2A-204ENST00000481786 ABCC10Q5T3U5 1492 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 TRIM37O94972 964 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 HNRNPUQ00839 825 aaKnown RBP eCLIP3.88□□□□□ -1.79
USH2A-204ENST00000481786 PSMD2Q13200 908 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 LRRC14Q15048 493 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 PCNX4Q63HM2 1172 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 SCARA3Q6AZY7 606 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 LLGL2Q6P1M3 1020 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 LETMD1Q6P1Q0 360 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 HHIPL2Q6UWX4 724 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 TMC4Q7Z404 712 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 CDH24Q86UP0 819 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 TMEM151BQ8IW70 566 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 SHISA4Q96DD7 197 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 FAM161BQ96MY7 647 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 PCDHA4Q9UN74 947 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 CYP8B1Q9UNU6 501 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 ABCC8Q09428 1581 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 MROH2BQ7Z745 1585 aa3.88□□□□□ -1.79
USH2A-204ENST00000481786 PRAMEF27A3QJZ7 478 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 CTSHP09668 335 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 TPP2P29144 1249 aaPredicted RBP3.87□□□□□ -1.79
USH2A-204ENST00000481786 CDK8P49336 464 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 XPCQ01831 940 aaPredicted RBP3.87□□□□□ -1.79
USH2A-204ENST00000481786 PTPN11Q06124 597 aaPredicted RBP3.87□□□□□ -1.79
USH2A-204ENST00000481786 RTP5Q14D33 572 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 MEI1Q5TIA1 1274 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 TMPRSS7Q7RTY8 843 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 SIRT2Q8IXJ6 389 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 PDZD8Q8NEN9 1154 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 SIGLEC10Q96LC7 697 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 Q96M66 194 aa3.87□□□□□ -1.79
USH2A-204ENST00000481786 DUSP15Q9H1R2 295 aaPredicted RBP3.87□□□□□ -1.79
USH2A-204ENST00000481786 TOPBP1Q92547 1522 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 RPS26P62854 115 aaKnown RBP3.86□□□□□ -1.79
USH2A-204ENST00000481786 ZXDAP98168 799 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 CCDC85BQ15834 202 aaPredicted RBP3.86□□□□□ -1.79
USH2A-204ENST00000481786 GAB4Q2WGN9 574 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 TTBK2Q6IQ55 1244 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 LRFN4Q6PJG9 635 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 TMEFF1Q8IYR6 380 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 ZNF507Q8TCN5 953 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 GAL3ST3Q96A11 431 aa3.86□□□□□ -1.79
USH2A-204ENST00000481786 TEPSINQ96N21 525 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms