RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 DLGAP5Q15398 846 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 KAT14Q9H8E8 782 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 CCDC39Q9UFE4 941 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 CEP131Q9UPN4 1083 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
RXRA-202ENST00000481739 GUCY1A2P33402 732 aa18.14■□□□□ 0.5
RXRA-202ENST00000481739 PLCD1P51178 756 aa18.14■□□□□ 0.5
RXRA-202ENST00000481739 PTPAQ15257 358 aa18.14■□□□□ 0.5
RXRA-202ENST00000481739 ZSCAN30Q86W11 494 aa18.14■□□□□ 0.5
RXRA-202ENST00000481739 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.5
RXRA-202ENST00000481739 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.5
RXRA-202ENST00000481739 TDRD3Q9H7E2 651 aaKnown RBP18.14■□□□□ 0.5
RXRA-202ENST00000481739 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.5
RXRA-202ENST00000481739 DDX60LQ5H9U9 1706 aaKnown RBP18.14■□□□□ 0.49
RXRA-202ENST00000481739 FAM237AA0A1B0GTK4 181 aa18.14■□□□□ 0.49
RXRA-202ENST00000481739 TFAP4Q01664 338 aa18.14■□□□□ 0.49
RXRA-202ENST00000481739 FAM47AQ5JRC9 791 aa18.14■□□□□ 0.49
RXRA-202ENST00000481739 AXDND1Q5T1B0 1012 aaPredicted RBP18.14■□□□□ 0.49
RXRA-202ENST00000481739 C16orf86Q6ZW13 317 aa18.14■□□□□ 0.49
RXRA-202ENST00000481739 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
RXRA-202ENST00000481739 TIGD1Q96MW7 591 aa18.14■□□□□ 0.49
RXRA-202ENST00000481739 CUTAO60888 179 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 BMP15O95972 392 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 TSPY3P0CV98 308 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 TSPY8P0CW00 308 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 LMNB1P20700 586 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 NFIAQ12857 509 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 STX1AQ16623 288 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 RCSD1Q6JBY9 416 aa18.13■□□□□ 0.49
RXRA-202ENST00000481739 OSBPL5Q9H0X9 879 aaPredicted RBP18.13■□□□□ 0.49
RXRA-202ENST00000481739 CNTNAP5Q8WYK1 1306 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 FZD9O00144 591 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 TCP10Q12799 353 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 PKN1Q16512 942 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 PHF20Q9BVI0 1012 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 TMOD2Q9NZR1 351 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 CLCN1P35523 988 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 KRT2P35908 639 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 ANO6Q4KMQ2 910 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 CCDC82Q8N4S0 544 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 LZTS2Q9BRK4 669 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 ANO10Q9NW15 660 aa18.12■□□□□ 0.49
RXRA-202ENST00000481739 PLEKHA8P1O95397 391 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■□□□□ 8.7
RXRA-202ENST00000481739 RPS12P25398 132 aaKnown RBP18.11■□□□□ 0.49
RXRA-202ENST00000481739 NDUFA8P51970 172 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 SLC44A5Q8NCS7 719 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 PNMA1Q8ND90 353 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 SDF4Q9BRK5 362 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 USP25Q9UHP3 1055 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 V9GY48 417 aaPredicted RBP18.11■□□□□ 0.49
RXRA-202ENST00000481739 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
RXRA-202ENST00000481739 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
RXRA-202ENST00000481739 ZSCAN29Q8IWY8 852 aaPredicted RBP18.1■□□□□ 0.49
RXRA-202ENST00000481739 CMTR1Q8N1G2 835 aaKnown RBP18.1■□□□□ 0.49
RXRA-202ENST00000481739 KRI1Q8N9T8 703 aaKnown RBP18.1■□□□□ 0.49
RXRA-202ENST00000481739 IDI2Q9BXS1 227 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 SH3GLB2Q9NR46 395 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 NOL7Q9UMY1 257 aaKnown RBP18.1■□□□□ 0.49
RXRA-202ENST00000481739 KCNJ14Q9UNX9 436 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 HPSEQ9Y251 543 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 ZNF541Q9H0D2 1346 aa18.1■□□□□ 0.49
RXRA-202ENST00000481739 A0A1B0GVL5 298 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 UBE2Q2LH0YL09 131 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 NMT2O60551 498 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 RASA1P20936 1047 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 CDK8P49336 464 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 ZNF165P49910 485 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 GRM4Q14833 912 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 RBM26Q5T8P6 1007 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 ZFPM1Q8IX07 1006 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 ELOA2Q8IYF1 753 aaPredicted RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 NEDD1Q8NHV4 660 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 FAM198AQ9UFP1 575 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 MYH6P13533 1939 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 ZNF202O95125 648 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 ADCY5O95622 1261 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 SCG2P13521 617 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 PFKFB1P16118 471 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 CALML3P27482 149 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 ZRSR1Q15695 479 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 PFKFB3Q16875 520 aaPredicted RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 RESP18Q5W5W9 173 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 SRBD1Q8N5C6 995 aaKnown RBP18.09■□□□□ 0.49
RXRA-202ENST00000481739 CBX8Q9HC52 389 aa18.09■□□□□ 0.49
RXRA-202ENST00000481739 MYOZ2Q9NPC6 264 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms