RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 AACSQ86V21 672 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 PANK1Q8TE04 598 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 MOV10L1Q9BXT6 1211 aaKnown RBP11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 DDX20Q9UHI6 824 aaKnown RBP11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 PLXNA1Q9UIW2 1896 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 ANO1Q5XXA6 986 aa11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 GUCD1Q96NT3 240 aa11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
GTF3C2-210ENST00000480989 CYP2D7A0A087X1C5 515 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 MAGEB6P1A0A0J9YX57 407 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 PRKAB2O43741 272 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 AKR1B1P15121 316 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 ADORA2AP29274 412 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 USP14P54578 494 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 TTC6Q86TZ1 520 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 LPAR1Q92633 364 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
GTF3C2-210ENST00000480989 ERCC3P19447 782 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 RTP1P59025 263 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 CCNA1P78396 465 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 GJC2Q5T442 439 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
GTF3C2-210ENST00000480989 DNM1LO00429 736 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 GOLIM4O00461 696 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 ITGB8P26012 769 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 SNX17Q15036 470 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 C9orf50Q5SZB4 431 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 CERS3Q8IU89 383 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 MCM9Q9NXL9 1143 aa11.29□□□□□ -0.6
GTF3C2-210ENST00000480989 APBB1O00213 710 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 CNGA1P29973 690 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 DSG3P32926 999 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 COG2Q14746 738 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 TMEM132BQ14DG7 1078 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 DNAJC2Q99543 621 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 FBXO28Q9NVF7 368 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
GTF3C2-210ENST00000480989 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 MPHOSPH10O00566 681 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 MBD4O95243 580 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 ADD2P35612 726 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 SHHQ15465 462 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TRIM60Q495X7 471 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 SLC39A5Q6ZMH5 540 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TMEM179Q6ZVK1 233 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 SHCBP1Q8NEM2 672 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 MAML3Q96JK9 1138 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TANGO6Q9C0B7 1094 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 MCM3APO60318 1980 aa11.27□□□□□ -0.61
GTF3C2-210ENST00000480989 SEPT4O43236 478 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 MSCO60682 206 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 EPHB4P54760 987 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 ICA1Q05084 483 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 LRRC41Q15345 812 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms