RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 TANGO6Q9C0B7 1094 aa10.9□□□□□ -0.66
SRGAP3-206ENST00000480750 RWDD1Q9H446 243 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-206ENST00000480750 RPAP3Q9H6T3 665 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-206ENST00000480750 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 GSG1L2A8MUP6 293 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 INHAP05111 366 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 MAPK4P31152 587 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 Q3C1V9 767 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 GIMAP6Q6P9H5 292 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 PXYLP1Q8TE99 480 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 SOCS4Q8WXH5 440 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 ZNF287Q9HBT7 754 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 CEP290O15078 2479 aa10.89□□□□□ -0.67
SRGAP3-206ENST00000480750 RLFQ13129 1914 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 SLC3A2P08195 630 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 CYP2B6P20813 491 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 PDE1AP54750 535 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 SBK1Q52WX2 424 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 SIAH1Q8IUQ4 282 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 CHMP4CQ96CF2 233 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 NAPBQ9H115 298 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 UNC93B1Q9H1C4 597 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 INCENPQ9NQS7 918 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 RBPJLQ9UBG7 517 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 IVNS1ABPQ9Y6Y0 642 aa10.88□□□□□ -0.67
SRGAP3-206ENST00000480750 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 PATL2C9JE40 543 aaKnown RBP10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 PRDM1O75626 825 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 HMGCRP04035 888 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 GJB1P08034 283 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 COG2Q14746 738 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 LPAR1Q92633 364 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 EVI5LQ96CN4 794 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 HOXC10Q9NYD6 342 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 A0A0G2JMZ2 1700 aa10.87□□□□□ -0.67
SRGAP3-206ENST00000480750 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 CNMDO75829 334 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 FLOT1O75955 427 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 ZKSCAN1P17029 563 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 RGS2P41220 211 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 GJA8P48165 433 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 PDE4BQ07343 736 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 TRIM32Q13049 653 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 PLS1Q14651 629 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 ZMYM1Q5SVZ6 1142 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 TRMT44Q8IYL2 757 aaKnown RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 U2AF1L4Q8WU68 220 aaKnown RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 PORCNQ9H237 461 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 VCPKMTQ9H867 229 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 TMX2Q9Y320 296 aa10.86□□□□□ -0.67
SRGAP3-206ENST00000480750 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 VPS53Q5VIR6 699 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 LBX2Q6XYB7 198 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 SMC5Q8IY18 1101 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 FAM227BQ96M60 508 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 STAP2Q9UGK3 403 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 GJD2Q9UKL4 321 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 ISY1Q9ULR0 285 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 TACC3Q9Y6A5 838 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 FRMPD3Q5JV73 1810 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 ROBO3Q96MS0 1386 aa10.85□□□□□ -0.67
SRGAP3-206ENST00000480750 FOXP2O15409 715 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 FARP2O94887 1054 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 SGPL1O95470 568 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 CAPN2P17655 700 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 RASA1P20936 1047 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 DSG3P32926 999 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 CTDSPL2Q05D32 466 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 FAM47AQ5JRC9 791 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 MB21D1Q8N884 522 aa10.84□□□□□ -0.67
SRGAP3-206ENST00000480750 TRIB2Q92519 343 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms