RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GTF3C2Q8WUA4 911 aaPredicted RBP24.24■■□□□ 1.47
VARS-224ENST00000479051 CEP95Q96GE4 821 aa24.24■■□□□ 1.47
VARS-224ENST00000479051 TTLL1O95922 423 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 ESYT1Q9BSJ8 1104 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 RPAP3Q9H6T3 665 aaPredicted RBP24.23■■□□□ 1.47
VARS-224ENST00000479051 MTMR4Q9NYA4 1195 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 CLIP2Q9UDT6 1046 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 SYNPO2Q9UMS6 1093 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 LAMA4Q16363 1823 aa24.23■■□□□ 1.47
VARS-224ENST00000479051 TBC1D10CQ8IV04 446 aa24.22■■□□□ 1.47
VARS-224ENST00000479051 TNS4Q8IZW8 715 aa24.22■■□□□ 1.47
VARS-224ENST00000479051 CD99L2Q8TCZ2 262 aa24.22■■□□□ 1.47
VARS-224ENST00000479051 ESR2Q92731 530 aa24.22■■□□□ 1.47
VARS-224ENST00000479051 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
VARS-224ENST00000479051 WDR46O15213 610 aaKnown RBP24.21■■□□□ 1.47
VARS-224ENST00000479051 RAD21O60216 631 aa24.21■■□□□ 1.47
VARS-224ENST00000479051 BCRP11274 1271 aa24.21■■□□□ 1.47
VARS-224ENST00000479051 PTH1RQ03431 593 aa24.21■■□□□ 1.47
VARS-224ENST00000479051 PKN2Q16513 984 aaKnown RBP24.21■■□□□ 1.47
VARS-224ENST00000479051 CATSPERGQ6ZRH7 1159 aa24.21■■□□□ 1.47
VARS-224ENST00000479051 TANGO6Q9C0B7 1094 aa24.21■■□□□ 1.47
VARS-224ENST00000479051 HERVK_113P62684 666 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 LACTBP83111 547 aaPredicted RBP24.2■■□□□ 1.46
VARS-224ENST00000479051 FAM110CQ1W6H9 321 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 SPICE1Q8N0Z3 855 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 ANKRD13CQ8N6S4 541 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 P2RX7Q99572 595 aaKnown RBP24.2■■□□□ 1.46
VARS-224ENST00000479051 NBPF3Q9H094 633 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 CNNM2Q9H8M5 875 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 EFCC1Q9HA90 598 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 STX8Q9UNK0 236 aa24.2■■□□□ 1.46
VARS-224ENST00000479051 MAP4K1Q92918 833 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 MKL1Q969V6 931 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 KRT23Q9C075 422 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 ANO2Q9NQ90 1003 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 TRIM17Q9Y577 477 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 TACC3Q9Y6A5 838 aa24.19■■□□□ 1.46
VARS-224ENST00000479051 GNRH1P01148 92 aa24.18■■□□□ 1.46
VARS-224ENST00000479051 TRDNQ13061 729 aa24.18■■□□□ 1.46
VARS-224ENST00000479051 NEDD4P46934 1319 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 F5H6K3 240 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 FCGRTP55899 365 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 KLRC3Q07444 240 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 COG2Q14746 738 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 TCP11L1Q9NUJ3 509 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 HOXC10Q9NYD6 342 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 MYH4Q9Y623 1939 aa24.17■■□□□ 1.46
VARS-224ENST00000479051 FMNL1O95466 1100 aaPredicted RBP24.16■■□□□ 1.46
VARS-224ENST00000479051 CCDC178Q5BJE1 867 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 KIAA1755Q5JYT7 1200 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 OTOP1Q7RTM1 612 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 IQCA1Q86XH1 822 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 LRRC47Q8N1G4 583 aaKnown RBP24.16■■□□□ 1.46
VARS-224ENST00000479051 GMCL1P1Q8NEA9 526 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 MCOLN1Q9GZU1 580 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 IL17RBQ9NRM6 502 aa24.16■■□□□ 1.46
VARS-224ENST00000479051 RBM8AQ9Y5S9 174 aaKnown RBP24.16■■□□□ 1.46
VARS-224ENST00000479051 FLOT1O75955 427 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 NDUFB10O96000 172 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 HOXD10P28358 340 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 PSMC4P43686 418 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 GPRC5AQ8NFJ5 357 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 LSG1Q9H089 658 aaKnown RBP24.15■■□□□ 1.46
VARS-224ENST00000479051 MORF4L1Q9UBU8 362 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 RABGAP1Q9Y3P9 1069 aa24.15■■□□□ 1.46
VARS-224ENST00000479051 MYPNQ86TC9 1320 aa24.14■■□□□ 1.46
VARS-224ENST00000479051 B4E1Z4 1266 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 NMT2O60551 498 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 KDM4AO75164 1064 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 CYP21A2P08686 494 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 LBX2Q6XYB7 198 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 TTC14Q96N46 770 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 PAGR1Q9BTK6 254 aa24.14■■□□□ 1.45
VARS-224ENST00000479051 SPDYE16A6NNV3 312 aaPredicted RBP24.13■■□□□ 1.45
VARS-224ENST00000479051 PRMT2P55345 433 aa24.13■■□□□ 1.45
VARS-224ENST00000479051 FAM83BQ5T0W9 1011 aa24.13■■□□□ 1.45
VARS-224ENST00000479051 SLFN13Q68D06 897 aa24.13■■□□□ 1.45
VARS-224ENST00000479051 FBXO46Q6PJ61 603 aaPredicted RBP24.13■■□□□ 1.45
VARS-224ENST00000479051 RALYLQ86SE5 291 aaKnown RBP24.13■■□□□ 1.45
VARS-224ENST00000479051 CCAR1Q8IX12 1150 aaKnown RBP24.13■■□□□ 1.45
VARS-224ENST00000479051 ARHGAP39Q9C0H5 1083 aa24.13■■□□□ 1.45
VARS-224ENST00000479051 ECM2O94769 699 aaPredicted RBP24.12■■□□□ 1.45
VARS-224ENST00000479051 TOP1P11387 765 aaKnown RBP24.12■■□□□ 1.45
VARS-224ENST00000479051 NOVP48745 357 aa24.12■■□□□ 1.45
VARS-224ENST00000479051 CCNA1P78396 465 aa24.12■■□□□ 1.45
VARS-224ENST00000479051 MB21D1Q8N884 522 aa24.12■■□□□ 1.45
VARS-224ENST00000479051 UBAC1Q9BSL1 405 aa24.12■■□□□ 1.45
VARS-224ENST00000479051 RBPJLQ9UBG7 517 aa24.12■■□□□ 1.45
VARS-224ENST00000479051 ISY1Q9ULR0 285 aaKnown RBP24.12■■□□□ 1.45
VARS-224ENST00000479051 TNPO2O14787 897 aaKnown RBP24.11■■□□□ 1.45
VARS-224ENST00000479051 DSG3P32926 999 aa24.11■■□□□ 1.45
VARS-224ENST00000479051 ERVK-9P63128 1117 aa24.11■■□□□ 1.45
VARS-224ENST00000479051 ERVK-24P63145 666 aa24.11■■□□□ 1.45
VARS-224ENST00000479051 RNF20Q5VTR2 975 aa24.11■■□□□ 1.45
VARS-224ENST00000479051 SAMD1Q6SPF0 538 aaPredicted RBP24.11■■□□□ 1.45
VARS-224ENST00000479051 TRIM47Q96LD4 638 aa24.11■■□□□ 1.45
VARS-224ENST00000479051 BMP3P12645 472 aa24.1■■□□□ 1.45
VARS-224ENST00000479051 SLC1A4P43007 532 aa24.1■■□□□ 1.45
VARS-224ENST00000479051 DGKHQ86XP1 1220 aa24.1■■□□□ 1.45
VARS-224ENST00000479051 NCOA7Q8NI08 942 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms