RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TCRBV5S4A2TA0A5A2 114 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 MSCO60682 206 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 CYP2D6P10635 497 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 COG2Q14746 738 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 LHX8Q68G74 356 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 DPP9Q86TI2 863 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 DDRGK1Q96HY6 314 aa15.99■□□□□ 0.15
VCL-205ENST00000478896 CHMP4BQ9H444 224 aaKnown RBP15.99■□□□□ 0.15
VCL-205ENST00000478896 DDX20Q9UHI6 824 aaKnown RBP15.99■□□□□ 0.15
VCL-205ENST00000478896 ZNF236Q9UL36 1845 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 A0A1W2PRG0 241 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 MBD4O95243 580 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 COL6A1P12109 1028 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 ADD2P35612 726 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 ICA1Q05084 483 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 PLS1Q14651 629 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 LRRC26Q2I0M4 334 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
VCL-205ENST00000478896 TDHQ8IZJ6 230 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 DYNLL2Q96FJ2 89 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
VCL-205ENST00000478896 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 HOXC10Q9NYD6 342 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 SZT2Q5T011 3432 aa15.98■□□□□ 0.15
VCL-205ENST00000478896 PRKAB2O43741 272 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 FLOT1O75955 427 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 HOXC6P09630 235 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 ADORA2AP29274 412 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 CYP2C19P33261 490 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 CLEC10AQ8IUN9 316 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 SPICE1Q8N0Z3 855 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 LPAR1Q92633 364 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 MOV10L1Q9BXT6 1211 aaKnown RBP15.97■□□□□ 0.15
VCL-205ENST00000478896 SENP6Q9GZR1 1112 aaPredicted RBP15.97■□□□□ 0.15
VCL-205ENST00000478896 SPATC1LQ9H0A9 340 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
VCL-205ENST00000478896 RLFQ13129 1914 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 AKR1B1P15121 316 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 ERCC3P19447 782 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 MB21D1Q8N884 522 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
VCL-205ENST00000478896 PARP14Q460N5 1801 aa15.96■□□□□ 0.14
VCL-205ENST00000478896 STRNO43815 780 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 ATP5JP18859 108 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 DSG3P32926 999 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
VCL-205ENST00000478896 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
VCL-205ENST00000478896 SHCBP1Q8NEM2 672 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 CCDC17Q96LX7 622 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 HAUS7Q99871 368 aa15.95■□□□□ 0.14
VCL-205ENST00000478896 COL11A1P12107 1806 aaPredicted RBP15.94■□□□□ 0.14
VCL-205ENST00000478896 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
VCL-205ENST00000478896 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 DNM1LO00429 736 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 WDR46O15213 610 aaKnown RBP15.94■□□□□ 0.14
VCL-205ENST00000478896 RAD21O60216 631 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
VCL-205ENST00000478896 CYBAP13498 195 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 CDK8P49336 464 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 LRIT3Q3SXY7 679 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 KIAA1755Q5JYT7 1200 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 OLFML2BQ68BL8 750 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 ZSCAN25Q6NSZ9 544 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 ATG4CQ96DT6 458 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 VCPKMTQ9H867 229 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 PRKAG2Q9UGJ0 569 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 TMX2Q9Y320 296 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 SLC4A4Q9Y6R1 1079 aa15.94■□□□□ 0.14
VCL-205ENST00000478896 USP17L12C9JPN9 530 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 KBTBD13C9JR72 458 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 USP17L21D6R901 530 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 C12orf60Q5U649 245 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 GPR153Q6NV75 609 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 DEFB123Q8N688 67 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 SLC17A8Q8NDX2 589 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 TRPV1Q8NER1 839 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 LBHD1Q9BQE6 289 aaPredicted RBP15.93■□□□□ 0.14
VCL-205ENST00000478896 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 MROH8Q9H579 483 aa15.93■□□□□ 0.14
VCL-205ENST00000478896 CHGBP05060 677 aa15.92■□□□□ 0.14
VCL-205ENST00000478896 GJC2Q5T442 439 aaPredicted RBP15.92■□□□□ 0.14
VCL-205ENST00000478896 C16orf86Q6ZW13 317 aa15.92■□□□□ 0.14
VCL-205ENST00000478896 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
VCL-205ENST00000478896 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
VCL-205ENST00000478896 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
VCL-205ENST00000478896 SMIM22K7EJ46 135 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 SEPT4O43236 478 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 COBLO75128 1261 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 FCER1AP12319 257 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
VCL-205ENST00000478896 Q7L0L9 218 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 ARRDC4Q8NCT1 418 aa15.91■□□□□ 0.14
VCL-205ENST00000478896 KANSL2Q9H9L4 492 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms