RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 APBA2Q99767 749 aa18.99■□□□□ 0.63
GARNL3-215ENST00000478702 FLRT1Q9NZU1 646 aa18.99■□□□□ 0.63
GARNL3-215ENST00000478702 MAP2K5Q13163 448 aa18.98■□□□□ 0.63
GARNL3-215ENST00000478702 ZYXQ15942 572 aaKnown RBP18.98■□□□□ 0.63
GARNL3-215ENST00000478702 TTC6Q86TZ1 520 aa18.98■□□□□ 0.63
GARNL3-215ENST00000478702 SMC5Q8IY18 1101 aa18.98■□□□□ 0.63
GARNL3-215ENST00000478702 UBE2OQ9C0C9 1292 aaKnown RBP18.98■□□□□ 0.63
GARNL3-215ENST00000478702 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
GARNL3-215ENST00000478702 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
GARNL3-215ENST00000478702 SERPINB13Q9UIV8 391 aa18.98■□□□□ 0.63
GARNL3-215ENST00000478702 COL11A1P12107 1806 aaPredicted RBP18.97■□□□□ 0.63
GARNL3-215ENST00000478702 A0A0C4DFX4 3053 aa18.97■□□□□ 0.63
GARNL3-215ENST00000478702 CATSPERGQ6ZRH7 1159 aa18.97■□□□□ 0.63
GARNL3-215ENST00000478702 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
GARNL3-215ENST00000478702 DCP1AQ9NPI6 582 aaPredicted RBP18.97■□□□□ 0.63
GARNL3-215ENST00000478702 RABGAP1Q9Y3P9 1069 aa18.97■□□□□ 0.63
GARNL3-215ENST00000478702 SMCHD1A6NHR9 2005 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 CCAR1Q8IX12 1150 aaKnown RBP18.96■□□□□ 0.63
GARNL3-215ENST00000478702 ACER1Q8TDN7 264 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 PUS7LQ9H0K6 701 aaKnown RBP18.96■□□□□ 0.63
GARNL3-215ENST00000478702 MCM9Q9NXL9 1143 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 STXBP5LQ9Y2K9 1186 aa18.96■□□□□ 0.63
GARNL3-215ENST00000478702 GREB1LQ9C091 1923 aaPredicted RBP18.96■□□□□ 0.63
GARNL3-215ENST00000478702 UNC80Q8N2C7 3258 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 PRKAB2O43741 272 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 ZFYP08048 801 aaPredicted RBP18.95■□□□□ 0.62
GARNL3-215ENST00000478702 PLCD1P51178 756 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 MDM2Q00987 491 aaPredicted RBP18.95■□□□□ 0.62
GARNL3-215ENST00000478702 GABPAQ06546 454 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 APPBP2Q92624 585 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 FEZ1Q99689 392 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 BTBD7Q9P203 1132 aa18.95■□□□□ 0.62
GARNL3-215ENST00000478702 PLXNA1Q9UIW2 1896 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 RNF113AO15541 343 aaKnown RBP18.94■□□□□ 0.62
GARNL3-215ENST00000478702 IGHDP01880 384 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 POLR3DP05423 398 aaPredicted RBP18.94■□□□□ 0.62
GARNL3-215ENST00000478702 VCAM1P19320 739 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 PTPREP23469 700 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 EVX2Q03828 476 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 NPLOC4Q8TAT6 608 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 KIAA1683Q9H0B3 1180 aa18.94■□□□□ 0.62
GARNL3-215ENST00000478702 SLC15A5A6NIM6 579 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 IGHA2P01877 340 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 HOXC6P09630 235 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 SHMT1P34896 483 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 PDE1AP54750 535 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
GARNL3-215ENST00000478702 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 LNPKQ9C0E8 428 aa18.93■□□□□ 0.62
GARNL3-215ENST00000478702 LAMA2P24043 3122 aaKnown RBP18.93■□□□□ 0.62
GARNL3-215ENST00000478702 SPDYE16A6NNV3 312 aaPredicted RBP18.92■□□□□ 0.62
GARNL3-215ENST00000478702 CYP2D6P10635 497 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 USP14P54578 494 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 CCNA1P78396 465 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 GRB14Q14449 540 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 ABCB5Q2M3G0 1257 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 CERKLQ49MI3 558 aaPredicted RBP18.92■□□□□ 0.62
GARNL3-215ENST00000478702 WDR78Q5VTH9 848 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 TRPV1Q8NER1 839 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 SENP6Q9GZR1 1112 aaPredicted RBP18.92■□□□□ 0.62
GARNL3-215ENST00000478702 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
GARNL3-215ENST00000478702 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
GARNL3-215ENST00000478702 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
GARNL3-215ENST00000478702 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
GARNL3-215ENST00000478702 MFSD14CQ5VZR4 134 aa18.91■□□□□ 0.62
GARNL3-215ENST00000478702 STRBPQ96SI9 672 aaKnown RBP18.91■□□□□ 0.62
GARNL3-215ENST00000478702 M0R2C6 588 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 GPAA1O43292 621 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 CYP2C19P33261 490 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 NUCB1Q02818 461 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 LPAR1Q92633 364 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 RPAP3Q9H6T3 665 aaPredicted RBP18.9■□□□□ 0.62
GARNL3-215ENST00000478702 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
GARNL3-215ENST00000478702 SWAP70Q9UH65 585 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 ROBO3Q96MS0 1386 aa18.9■□□□□ 0.62
GARNL3-215ENST00000478702 A0A1W2PRG0 241 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 CYBAP13498 195 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 CNGA1P29973 690 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 SEPT2Q15019 361 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 C12orf60Q5U649 245 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 B4GALNT3Q6L9W6 998 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 AMOTL1Q8IY63 956 aa18.89■□□□□ 0.61
GARNL3-215ENST00000478702 SLC44A5Q8NCS7 719 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms