RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-222ENST00000477937 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 IGHDP01880 384 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 INHAP05111 366 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 GJB1P08034 283 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 CLEC10AQ8IUN9 316 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 STK11IPQ8N1F8 1099 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 VCPKMTQ9H867 229 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
HDAC7-222ENST00000477937 EPB41L4AQ9HCS5 686 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-222ENST00000477937 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
HDAC7-222ENST00000477937 PARP14Q460N5 1801 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-222ENST00000477937 CNMDO75829 334 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
HDAC7-222ENST00000477937 GJA8P48165 433 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 NAPBQ9H115 298 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 UNC93B1Q9H1C4 597 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 PORCNQ9H237 461 aa16.48■□□□□ 0.23
HDAC7-222ENST00000477937 HMGCRP04035 888 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 CYP2B6P20813 491 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 RASA1P20936 1047 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 KIAA1755Q5JYT7 1200 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-222ENST00000477937 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 GOPCQ9HD26 462 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 BRCA2P51587 3418 aa16.47■□□□□ 0.23
HDAC7-222ENST00000477937 FLOT1O75955 427 aa16.46■□□□□ 0.23
HDAC7-222ENST00000477937 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
HDAC7-222ENST00000477937 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
HDAC7-222ENST00000477937 NUCB1Q02818 461 aa16.46■□□□□ 0.23
HDAC7-222ENST00000477937 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
HDAC7-222ENST00000477937 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
HDAC7-222ENST00000477937 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC7-222ENST00000477937 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
HDAC7-222ENST00000477937 COL11A1P12107 1806 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-222ENST00000477937 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
HDAC7-222ENST00000477937 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
HDAC7-222ENST00000477937 SGPL1O95470 568 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 CAPN2P17655 700 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 DSG3P32926 999 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 RGS2P41220 211 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 PDE4BQ07343 736 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 MORN1Q5T089 497 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 TRMT44Q8IYL2 757 aaKnown RBP16.45■□□□□ 0.22
HDAC7-222ENST00000477937 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
HDAC7-222ENST00000477937 SHISA4Q96DD7 197 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 IVNS1ABPQ9Y6Y0 642 aa16.45■□□□□ 0.22
HDAC7-222ENST00000477937 RAD21O60216 631 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 PRDM1O75626 825 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 CCDC129Q6ZRS4 1044 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 USP6NLQ92738 828 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-222ENST00000477937 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-222ENST00000477937 NYAP2Q9P242 653 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 A0A0G2JMZ2 1700 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
HDAC7-222ENST00000477937 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
HDAC7-222ENST00000477937 PPARAQ07869 468 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-222ENST00000477937 TRIB2Q92519 343 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 OSBPL3Q9H4L5 887 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
HDAC7-222ENST00000477937 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
HDAC7-222ENST00000477937 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-222ENST00000477937 PTPREP23469 700 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 TRIM32Q13049 653 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 PLS1Q14651 629 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 ATG4CQ96DT6 458 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 APBA2Q99767 749 aa16.42■□□□□ 0.22
HDAC7-222ENST00000477937 MOV10L1Q9BXT6 1211 aaKnown RBP16.42■□□□□ 0.22
HDAC7-222ENST00000477937 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.42■□□□□ 0.22
HDAC7-222ENST00000477937 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 F5H6K3 240 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 STRNO43815 780 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 KLRC3Q07444 240 aa16.41■□□□□ 0.22
HDAC7-222ENST00000477937 ALX1Q15699 326 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms