RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MYCNP04198 464 aaPredicted RBP24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 SHMT1P34896 483 aa24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 TTC6Q86TZ1 520 aa24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 MIGA1Q8NAN2 632 aa24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 RNPC3Q96LT9 517 aaKnown RBP24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 SPATC1LQ9H0A9 340 aa24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 CABP5Q9NP86 173 aa24.72■■□□□ 1.55
PDLIM1-202ENST00000477757 COBLO75128 1261 aa24.71■■□□□ 1.55
PDLIM1-202ENST00000477757 GUCY1A2P33402 732 aa24.71■■□□□ 1.55
PDLIM1-202ENST00000477757 TLE2Q04725 743 aa24.71■■□□□ 1.55
PDLIM1-202ENST00000477757 FAM47AQ5JRC9 791 aa24.71■■□□□ 1.55
PDLIM1-202ENST00000477757 FERMT2Q96AC1 680 aa24.71■■□□□ 1.55
PDLIM1-202ENST00000477757 ERCC3P19447 782 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 ITGB8P26012 769 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 COG2Q14746 738 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 TJAP1Q5JTD0 557 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 SLC5A4Q9NY91 659 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 HOXC10Q9NYD6 342 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 PHF24Q9UPV7 400 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 TACC3Q9Y6A5 838 aa24.7■■□□□ 1.54
PDLIM1-202ENST00000477757 IDH1O75874 414 aaKnown RBP24.69■■□□□ 1.54
PDLIM1-202ENST00000477757 EPHB4P54760 987 aa24.69■■□□□ 1.54
PDLIM1-202ENST00000477757 ABRAQ8N0Z2 381 aa24.69■■□□□ 1.54
PDLIM1-202ENST00000477757 TANGO6Q9C0B7 1094 aa24.69■■□□□ 1.54
PDLIM1-202ENST00000477757 NAV1Q8NEY1 1877 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 ROBO3Q96MS0 1386 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 CLTBP09497 229 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 POLA2Q14181 598 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 SEPT2Q15019 361 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 MB21D1Q8N884 522 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 USP38Q8NB14 1042 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 MROH8Q9H579 483 aa24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 DBNLQ9UJU6 430 aaKnown RBP24.68■■□□□ 1.54
PDLIM1-202ENST00000477757 KIAA0355O15063 1070 aa24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 TRIM27P14373 513 aa24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 OS9Q13438 667 aaPredicted RBP24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 PRAMEF19Q5SWL8 479 aa24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 TMED8Q6PL24 325 aaPredicted RBP24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 MAGEB6Q8N7X4 407 aa24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 MAML3Q96JK9 1138 aa24.67■■□□□ 1.54
PDLIM1-202ENST00000477757 A0A1W2PRG0 241 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 DNAJB2P25686 324 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 PLCD1P51178 756 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 GABPAQ06546 454 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 GRIN2CQ14957 1233 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 XPNPEP3Q9NQH7 507 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 TLR7Q9NYK1 1049 aaKnown RBP24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 NRBP1Q9UHY1 535 aa24.66■■□□□ 1.54
PDLIM1-202ENST00000477757 TNFRSF10AO00220 468 aa24.65■■□□□ 1.54
PDLIM1-202ENST00000477757 RARBP10826 455 aa24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 RAG1P15918 1043 aa24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 COL9A1P20849 921 aa24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 FPGSQ05932 587 aa24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 SSH3Q8TE77 659 aa24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 RIOK1Q9BRS2 568 aaKnown RBP24.64■■□□□ 1.54
PDLIM1-202ENST00000477757 CHD9Q3L8U1 2897 aa24.64■■□□□ 1.53
PDLIM1-202ENST00000477757 IPO8O15397 1037 aaKnown RBP24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 DSG3P32926 999 aa24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 RNF180Q86T96 592 aa24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 NCAPG2Q86XI2 1143 aa24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 TNNQ9UQP3 1299 aa24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 PARP14Q460N5 1801 aa24.63■■□□□ 1.53
PDLIM1-202ENST00000477757 A0A1W2PQ45 241 aaPredicted RBP24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 A0A1W2PQY0 241 aa24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 PQBP1O60828 265 aaKnown RBP24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 FCER1AP12319 257 aa24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 MAP3K12Q12852 859 aa24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 PLS1Q14651 629 aa24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 KIAA1755Q5JYT7 1200 aa24.62■■□□□ 1.53
PDLIM1-202ENST00000477757 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 MPHOSPH10O00566 681 aaKnown RBP24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 SURF6O75683 361 aaKnown RBP24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 PGK1P00558 417 aa24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 POLR3DP05423 398 aaPredicted RBP24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 ATG4CQ96DT6 458 aa24.61■■□□□ 1.53
PDLIM1-202ENST00000477757 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 FLOT1O75955 427 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 ANKRD33Q7Z3H0 272 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 ZNF576Q9H609 170 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 ANTXR1Q9H6X2 564 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 TMEM39AQ9NV64 488 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 BDP1A6H8Y1 2624 aa24.6■■□□□ 1.53
PDLIM1-202ENST00000477757 EVX2Q03828 476 aa24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 TMEM179Q6ZVK1 233 aa24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 TIFAQ96CG3 184 aa24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 EAF2Q96CJ1 260 aaPredicted RBP24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 TOX2Q96NM4 488 aa24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 CCDC8Q9H0W5 538 aaPredicted RBP24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
PDLIM1-202ENST00000477757 SLC25A27O95847 323 aa24.58■■□□□ 1.53
PDLIM1-202ENST00000477757 FAAP100Q0VG06 881 aa24.58■■□□□ 1.53
PDLIM1-202ENST00000477757 CLUAP1Q96AJ1 413 aa24.58■■□□□ 1.53
PDLIM1-202ENST00000477757 TINF2Q9BSI4 451 aa24.58■■□□□ 1.53
PDLIM1-202ENST00000477757 SMCHD1A6NHR9 2005 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 ADAMTS4O75173 837 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 AKR1A1P14550 325 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 ATP8B2P98198 1209 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 TMEM132BQ14DG7 1078 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 MMP19Q99542 508 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms