RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 NAPBQ9H115 298 aa14.61□□□□□ -0.07
PTPN7-210ENST00000477625 HOXC10Q9NYD6 342 aa14.61□□□□□ -0.07
PTPN7-210ENST00000477625 RABGAP1Q9Y3P9 1069 aa14.61□□□□□ -0.07
PTPN7-210ENST00000477625 KIAA0100Q14667 2235 aaKnown RBP14.61□□□□□ -0.07
PTPN7-210ENST00000477625 TRIM6-TRIM34B2RNG4 842 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 ELNP15502 786 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 MAPK4P31152 587 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 UBXN2AP68543 259 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 MTFR1Q15390 333 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
PTPN7-210ENST00000477625 ZNF444Q8N0Y2 327 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-210ENST00000477625 RILPL2Q969X0 211 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 BRCA2P51587 3418 aa14.6□□□□□ -0.07
PTPN7-210ENST00000477625 MYH8P13535 1937 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-210ENST00000477625 FOXP2O15409 715 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 CNMDO75829 334 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 SLC3A2P08195 630 aaKnown RBP14.59□□□□□ -0.07
PTPN7-210ENST00000477625 CCL5P13501 91 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 CCNA1P78396 465 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 PPARAQ07869 468 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 MCMDC2Q4G0Z9 681 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 SPICE1Q8N0Z3 855 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 FAM227BQ96M60 508 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 PORCNQ9H237 461 aa14.59□□□□□ -0.07
PTPN7-210ENST00000477625 DOCK3Q8IZD9 2030 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 PRDM1O75626 825 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 PDE4BQ07343 736 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 VPS53Q5VIR6 699 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 NUDT12Q9BQG2 462 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 RNF208Q9H0X6 261 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 GOPCQ9HD26 462 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 BTBD7Q9P203 1132 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 NYAP2Q9P242 653 aa14.58□□□□□ -0.08
PTPN7-210ENST00000477625 TNRC18O15417 2968 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-210ENST00000477625 IGKV6D-41A0A0C4DH26 115 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 A0A0D9SFI3 127 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
PTPN7-210ENST00000477625 FLOT1O75955 427 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 INHAP05111 366 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 GJB1P08034 283 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 SDSP20132 328 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 DSG3P32926 999 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 NMIQ13287 307 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-210ENST00000477625 ALX1Q15699 326 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 NKX2-3Q8TAU0 364 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
PTPN7-210ENST00000477625 RBBP6Q7Z6E9 1792 aaKnown RBP14.57□□□□□ -0.08
PTPN7-210ENST00000477625 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
PTPN7-210ENST00000477625 CYP2B6P20813 491 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 MB21D1Q8N884 522 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 USP6NLQ92738 828 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 MKL1Q969V6 931 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 UNC93B1Q9H1C4 597 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
PTPN7-210ENST00000477625 CLIP2Q9UDT6 1046 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 ANAPC4Q9UJX5 808 aa14.56□□□□□ -0.08
PTPN7-210ENST00000477625 F5H6K3 240 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 RAD21O60216 631 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 FGAP02671 866 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 HMGCRP04035 888 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 TSPY3P0CV98 308 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 TSPY8P0CW00 308 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 HSPD1P10809 573 aaKnown RBP14.55□□□□□ -0.08
PTPN7-210ENST00000477625 GJA8P48165 433 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 TFAP4Q01664 338 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 KLRC3Q07444 240 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 MORN1Q5T089 497 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 ZNF589Q86UQ0 364 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-210ENST00000477625 NEDD1Q8NHV4 660 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
PTPN7-210ENST00000477625 TTLL1O95922 423 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 PTPREP23469 700 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 RGS2P41220 211 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 MFAP1P55081 439 aaKnown RBP14.54□□□□□ -0.08
PTPN7-210ENST00000477625 CTDSPL2Q05D32 466 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 FAM47AQ5JRC9 791 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 WDR78Q5VTH9 848 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
PTPN7-210ENST00000477625 ATG4CQ96DT6 458 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 MOV10L1Q9BXT6 1211 aaKnown RBP14.54□□□□□ -0.08
PTPN7-210ENST00000477625 SPATC1LQ9H0A9 340 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 INCENPQ9NQS7 918 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 SYNPO2Q9UMS6 1093 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN7-210ENST00000477625 CCDC171Q6TFL3 1326 aa14.54□□□□□ -0.08
PTPN7-210ENST00000477625 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-210ENST00000477625 PLIN4Q96Q06 1357 aa14.53□□□□□ -0.08
PTPN7-210ENST00000477625 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
PTPN7-210ENST00000477625 HIP1O00291 1037 aa14.53□□□□□ -0.08
PTPN7-210ENST00000477625 SGPL1O95470 568 aa14.53□□□□□ -0.08
PTPN7-210ENST00000477625 NDUFB10O96000 172 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms