RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 CLCQ05315 142 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 EGR3Q06889 387 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 GAB4Q2WGN9 574 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 MPZL3Q6UWV2 235 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 TSPYL5Q86VY4 417 aaPredicted RBP7.9□□□□□ -1.14
VPS50-213ENST00000477572 BACH2Q9BYV9 841 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 GPR62Q9BZJ7 368 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 ANTXR1Q9H6X2 564 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
VPS50-213ENST00000477572 FARP2O94887 1054 aaPredicted RBP7.89□□□□□ -1.15
VPS50-213ENST00000477572 UBOX5O94941 541 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 SRFP11831 508 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 MLECQ14165 292 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 PRR23BQ6ZRT6 265 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 LRRC3Q9BY71 257 aa7.89□□□□□ -1.15
VPS50-213ENST00000477572 ROBO2Q9HCK4 1378 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 RGS13O14921 159 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 GLI1P08151 1106 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 GMIPQ9P107 970 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 TMEM59LQ9UK28 342 aa7.88□□□□□ -1.15
VPS50-213ENST00000477572 CLEC16AQ2KHT3 1053 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 KSR1Q8IVT5 923 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 EAF1Q96JC9 268 aaPredicted RBP7.87□□□□□ -1.15
VPS50-213ENST00000477572 ZNF512BQ96KM6 892 aaPredicted RBP7.87□□□□□ -1.15
VPS50-213ENST00000477572 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 ASPNQ9BXN1 380 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 C19orf44Q9H6X5 657 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 PCDHGB7Q9Y5F8 929 aa7.87□□□□□ -1.15
VPS50-213ENST00000477572 ATE1O95260 518 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 RAC2P15153 192 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 ZNF76P36508 570 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 ZNF394Q53GI3 561 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 ABHD4Q8TB40 342 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 MYLIPQ8WY64 445 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 NKD1Q969G9 470 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 ATG4CQ96DT6 458 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 CCDC120Q96HB5 630 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 SPON2Q9BUD6 331 aa7.86□□□□□ -1.15
VPS50-213ENST00000477572 FAM86C2PA6NEL3 165 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 VWCEQ96DN2 955 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
VPS50-213ENST00000477572 NMIQ13287 307 aaPredicted RBP7.84□□□□□ -1.15
VPS50-213ENST00000477572 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
VPS50-213ENST00000477572 TMC3Q7Z5M5 1100 aa7.84□□□□□ -1.15
VPS50-213ENST00000477572 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
VPS50-213ENST00000477572 ZGLP1P0C6A0 271 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 ZNF165P49910 485 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 FANCCQ00597 558 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 PKN1Q16512 942 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 NLRC3Q7RTR2 1065 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 SLC38A3Q99624 504 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 NT5C1AQ9BXI3 368 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 NSUN3Q9H649 340 aaKnown RBP7.83□□□□□ -1.16
VPS50-213ENST00000477572 CNNM2Q9H8M5 875 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
VPS50-213ENST00000477572 RBM47A0AV96 593 aaKnown RBP7.82□□□□□ -1.16
VPS50-213ENST00000477572 BTBD11A6QL63 1104 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 HPXP02790 462 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 FZD5Q13467 585 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 TIGD5Q53EQ6 642 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 NBPF12Q5TAG4 269 aaPredicted RBP7.82□□□□□ -1.16
VPS50-213ENST00000477572 CDCP2Q5VXM1 449 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 SLITRK4Q8IW52 837 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
VPS50-213ENST00000477572 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 RNF32Q9H0A6 362 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 EBF1Q9UH73 591 aa7.82□□□□□ -1.16
VPS50-213ENST00000477572 GALK1P51570 392 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 RNF4P78317 190 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 JAG1P78504 1218 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 TEKQ02763 1124 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 NBPF9Q3BBW0 867 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 TMEM192Q8IY95 271 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS50-213ENST00000477572 SP110Q9HB58 689 aa7.81□□□□□ -1.16
VPS50-213ENST00000477572 CLEC3AO75596 197 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 NME1P15531 152 aaKnown RBP7.8□□□□□ -1.16
VPS50-213ENST00000477572 RPL10P27635 214 aaKnown RBP7.8□□□□□ -1.16
VPS50-213ENST00000477572 FBXW10Q5XX13 1052 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 SYDE1Q6ZW31 735 aaPredicted RBP7.8□□□□□ -1.16
VPS50-213ENST00000477572 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
VPS50-213ENST00000477572 SLC9A7Q96T83 725 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 FOXP3Q9BZS1 431 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 PRDM14Q9GZV8 571 aa7.8□□□□□ -1.16
VPS50-213ENST00000477572 MEIS1O00470 390 aa7.79□□□□□ -1.16
VPS50-213ENST00000477572 FKTNO75072 461 aa7.79□□□□□ -1.16
VPS50-213ENST00000477572 ZPBP2Q6X784 338 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms