RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 ERVK-9P63128 1117 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 ERVK-24P63145 666 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 PORCNQ9H237 461 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 KANSL2Q9H9L4 492 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 BTBD7Q9P203 1132 aa18.6■□□□□ 0.57
COMMD6-209ENST00000477377 PRDM1O75626 825 aa18.59■□□□□ 0.57
COMMD6-209ENST00000477377 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
COMMD6-209ENST00000477377 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
COMMD6-209ENST00000477377 VCPKMTQ9H867 229 aa18.59■□□□□ 0.57
COMMD6-209ENST00000477377 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
COMMD6-209ENST00000477377 ADCY3O60266 1144 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.56
COMMD6-209ENST00000477377 ELNP15502 786 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 PPARAQ07869 468 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 NMIQ13287 307 aaPredicted RBP18.58■□□□□ 0.56
COMMD6-209ENST00000477377 MCMDC2Q4G0Z9 681 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 GTF3C2Q8WUA4 911 aaPredicted RBP18.58■□□□□ 0.56
COMMD6-209ENST00000477377 USP6NLQ92738 828 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 COA7Q96BR5 231 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 ARHGEF10LQ9HCE6 1279 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 RABGAP1Q9Y3P9 1069 aa18.58■□□□□ 0.56
COMMD6-209ENST00000477377 SDSP20132 328 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 COG2Q14746 738 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 ALX1Q15699 326 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 LPAR1Q92633 364 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 PAGR1Q9BTK6 254 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 NAPBQ9H115 298 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 MKNK2Q9HBH9 465 aa18.57■□□□□ 0.56
COMMD6-209ENST00000477377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.57■□□□□ 0.56
COMMD6-209ENST00000477377 TRIM6-TRIM34B2RNG4 842 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 DSG3P32926 999 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 MORN1Q5T089 497 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 RILPL2Q969X0 211 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 PARP14Q460N5 1801 aa18.56■□□□□ 0.56
COMMD6-209ENST00000477377 FGAP02671 866 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 FGRP09769 529 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 HSPD1P10809 573 aaKnown RBP18.55■□□□□ 0.56
COMMD6-209ENST00000477377 GPR142Q7Z601 462 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 NEDD1Q8NHV4 660 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 MKL1Q969V6 931 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 TMEM106CQ9BVX2 250 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 HOXC10Q9NYD6 342 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 ANAPC4Q9UJX5 808 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 PLIN4Q96Q06 1357 aa18.55■□□□□ 0.56
COMMD6-209ENST00000477377 A0A0G2JMZ2 1700 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 WDR46O15213 610 aaKnown RBP18.54■□□□□ 0.56
COMMD6-209ENST00000477377 CCL5P13501 91 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
COMMD6-209ENST00000477377 MAPK4P31152 587 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 CTDSPL2Q05D32 466 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 TRIM32Q13049 653 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 ZNF444Q8N0Y2 327 aaPredicted RBP18.54■□□□□ 0.56
COMMD6-209ENST00000477377 NKX2-3Q8TAU0 364 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 CEP95Q96GE4 821 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 MTMR4Q9NYA4 1195 aa18.54■□□□□ 0.56
COMMD6-209ENST00000477377 INHAP05111 366 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 ATP2B2Q01814 1243 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 PLEKHH3Q7Z736 793 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 TRIB2Q92519 343 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 ATG4CQ96DT6 458 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 TANGO6Q9C0B7 1094 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 NBPF3Q9H094 633 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 IL25Q9H293 177 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 FBXO28Q9NVF7 368 aa18.53■□□□□ 0.56
COMMD6-209ENST00000477377 F5H6K3 240 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 GJB1P08034 283 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 XRCC5P13010 732 aaKnown RBP18.52■□□□□ 0.56
COMMD6-209ENST00000477377 CYP2B6P20813 491 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 GJA8P48165 433 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 NOVP48745 357 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 TFAP4Q01664 338 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 KLRC3Q07444 240 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 NUDT12Q9BQG2 462 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 MOV10L1Q9BXT6 1211 aaKnown RBP18.52■□□□□ 0.56
COMMD6-209ENST00000477377 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 CLIP2Q9UDT6 1046 aa18.52■□□□□ 0.56
COMMD6-209ENST00000477377 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 FLOT1O75955 427 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 NDUFB10O96000 172 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 IGHA2P01877 340 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 PTPREP23469 700 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 UBXN2AP68543 259 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 PDE4BQ07343 736 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 FAM83BQ5T0W9 1011 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
COMMD6-209ENST00000477377 RNF208Q9H0X6 261 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 ZNF287Q9HBT7 754 aa18.51■□□□□ 0.55
COMMD6-209ENST00000477377 PAK6Q9NQU5 681 aaPredicted RBP18.51■□□□□ 0.55
COMMD6-209ENST00000477377 ZMYM6O95789 1325 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms