RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
NUP188-205ENST00000477069 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 MAD2L2Q9UI95 211 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 BMP6P22004 513 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
NUP188-205ENST00000477069 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
NUP188-205ENST00000477069 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
NUP188-205ENST00000477069 NOVP48745 357 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
NUP188-205ENST00000477069 PCDHA5Q9Y5H7 936 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
NUP188-205ENST00000477069 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
NUP188-205ENST00000477069 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
NUP188-205ENST00000477069 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
NUP188-205ENST00000477069 M0R2N6 131 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 BMP15O95972 392 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 SRGNP10124 158 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 PLCG2P16885 1265 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 POSTNQ15063 836 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
NUP188-205ENST00000477069 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
NUP188-205ENST00000477069 A0A087X0B3 334 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 PLSCR1O15162 318 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 ATP2C1P98194 919 aaPredicted RBP13.16□□□□□ -0.3
NUP188-205ENST00000477069 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
NUP188-205ENST00000477069 CYTH3O43739 400 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 ATP2B1P20020 1258 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 CDK8P49336 464 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
NUP188-205ENST00000477069 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
NUP188-205ENST00000477069 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
NUP188-205ENST00000477069 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 SH3RF1Q7Z6J0 888 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
NUP188-205ENST00000477069 SUGT1Q9Y2Z0 365 aa13.15□□□□□ -0.3
NUP188-205ENST00000477069 GNAQP50148 359 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 NLRP5P59047 1200 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 MYL5Q02045 173 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 MORC3Q14149 939 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 IMPACTQ9P2X3 320 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
NUP188-205ENST00000477069 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 NEMFO60524 1076 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 NPR1P16066 1061 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 CCZ1BP86790 482 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
NUP188-205ENST00000477069 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 EYA3Q99504 573 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
NUP188-205ENST00000477069 CALML3P27482 149 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 GTF2IP78347 998 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 ZNF174Q15697 407 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
NUP188-205ENST00000477069 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.312e-10■■■■□ 19.5
NUP188-205ENST00000477069 MYO1BO43795 1136 aa13.13□□□□□ -0.31
NUP188-205ENST00000477069 ATP1A3P13637 1013 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms