RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 CCDC173Q0VFZ6 552 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 SP140Q13342 867 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 CCDC30Q5VVM6 783 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 KAZNQ674X7 775 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 PNMA8AQ86V59 439 aaPredicted RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 DHTKD1Q96HY7 919 aaPredicted RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 CORO1BQ9BR76 489 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 DDX21Q9NR30 783 aaKnown RBP eCLIP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 PDRG1Q9NUG6 133 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 SLC5A4Q9NY91 659 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 LCMT1Q9UIC8 334 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 NOSIPQ9Y314 301 aaKnown RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 TSPY2A6NKD2 308 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 NDUFB5O43674 189 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 TBCAO75347 108 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 GNRH1P01148 92 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 TSPY3P0CV98 308 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 TSPY8P0CW00 308 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 HSPA4P34932 840 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 TSPY1Q01534 308 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 RBL2Q08999 1139 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 LRP8Q14114 963 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 CAPRIN2Q6IMN6 1127 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 B4GALNT3Q6L9W6 998 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 FAM114A1Q8IWE2 563 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 NAT8LQ8N9F0 302 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 ZNF511Q8NB15 262 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 SNIP1Q8TAD8 396 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 GPT2Q8TD30 523 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 APPBP2Q92624 585 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 NUDT16Q96DE0 195 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 NEK1Q96PY6 1258 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 AP1M1Q9BXS5 423 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 RNF19AQ9NV58 838 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 SLAIN2Q9P270 581 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 PA2G4Q9UQ80 394 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 IPPQ9Y573 584 aa6.77□□□□□ -1.33
SPTLC3-205ENST00000476791 J3QL48 77 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TOR1BO14657 336 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 PARP1P09874 1014 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 KRT10P13645 584 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 MXI1P50539 228 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 CDR1P51861 262 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 NFE2Q16621 373 aaPredicted RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 NBPF8Q3BBV2 869 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 WDR44Q5JSH3 913 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 SYT10Q6XYQ8 523 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ARHGEF18Q6ZSZ5 1173 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 MAATS1Q7Z4T9 603 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ARMC2Q8NEN0 867 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ERMNQ8TAM6 284 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 SEMA4AQ9H3S1 761 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 HPS4Q9NQG7 708 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 SMYD2Q9NRG4 433 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 EVC2Q86UK5 1308 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TRIM64A6NGJ6 449 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TRIM64BA6NI03 449 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ENO4A6NNW6 628 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 M0QX08 132 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 PLIN1O60240 522 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ARIH2O95376 493 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 BAG4O95429 457 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TPM1P09493 284 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ROR1Q01973 937 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 RRP12Q5JTH9 1297 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 EMC10Q5UCC4 262 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ANO1Q5XXA6 986 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 SLC4A10Q6U841 1118 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 PPHLN1Q8NEY8 458 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 ANKRD7Q92527 254 aa6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 RBM14Q96PK6 669 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-205ENST00000476791 PHLDB1Q86UU1 1377 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 H7C1W4 665 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 CPLX1O14810 134 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 ST8SIA5O15466 376 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 SART1O43290 800 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 ENDOUP21128 410 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 CDC25CP30307 473 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 HS1BP3Q53T59 392 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 PPP4R3AQ6IN85 833 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 BPHLQ86WA6 291 aaPredicted RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 IFNL3Q8IZI9 196 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 SPICE1Q8N0Z3 855 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 ANKRD42Q8N9B4 389 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 GOT1L1Q8NHS2 421 aaPredicted RBP6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 BRSK1Q8TDC3 778 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 LRRN4Q8WUT4 740 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 DNAAF4Q8WXU2 420 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 TSGA13Q96PP4 275 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 TCF7L2Q9NQB0 619 aa6.75□□□□□ -1.33
SPTLC3-205ENST00000476791 KCNJ13O60928 360 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms