RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 DACH1Q9UI36 760 aa18.83■□□□□ 0.6
TMEM53-208ENST00000476724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
TMEM53-208ENST00000476724 PCDHB6Q9Y5E3 794 aa18.83■□□□□ 0.6
TMEM53-208ENST00000476724 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
TMEM53-208ENST00000476724 KRT2P35908 639 aa18.82■□□□□ 0.6
TMEM53-208ENST00000476724 SYCP1Q15431 976 aa18.82■□□□□ 0.6
TMEM53-208ENST00000476724 DPP8Q6V1X1 898 aaPredicted RBP18.82■□□□□ 0.6
TMEM53-208ENST00000476724 FOXP4Q8IVH2 680 aaPredicted RBP18.82■□□□□ 0.6
TMEM53-208ENST00000476724 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
TMEM53-208ENST00000476724 ARPP21Q9UBL0 812 aaPredicted RBP18.82■□□□□ 0.6
TMEM53-208ENST00000476724 SFPQP23246 707 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM53-208ENST00000476724 LMOD1P29536 600 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-208ENST00000476724 EVX2Q03828 476 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 POSTNQ15063 836 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 PTPN14Q15678 1187 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 CEP135Q66GS9 1140 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 ISM2Q6H9L7 571 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 NYAP1Q6ZVC0 841 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 HSD3B7Q9H2F3 369 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-208ENST00000476724 TRIM75PA6NK02 468 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 CCAR2Q8N163 923 aaKnown RBP18.81■□□□□ 0.6
TMEM53-208ENST00000476724 MLKLQ8NB16 471 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 OXER1Q8TDS5 423 aa18.81■□□□□ 0.6
TMEM53-208ENST00000476724 DCP1AQ9NPI6 582 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-208ENST00000476724 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
TMEM53-208ENST00000476724 UBASH3AP57075 661 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 V9GY48 417 aaPredicted RBP18.8■□□□□ 0.6
TMEM53-208ENST00000476724 GOLGB1Q14789 3259 aaKnown RBP18.8■□□□□ 0.6
TMEM53-208ENST00000476724 LAMB1P07942 1786 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 POLR2DO15514 142 aaKnown RBP18.8■□□□□ 0.6
TMEM53-208ENST00000476724 SERPINC1P01008 464 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 TUBB4AP04350 444 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 PDE4BQ07343 736 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 MFSD14BQ5SR56 506 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 TMTC3Q6ZXV5 915 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
TMEM53-208ENST00000476724 CTCFLQ8NI51 663 aaPredicted RBP18.8■□□□□ 0.6
TMEM53-208ENST00000476724 GTF2IP78347 998 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 DOK7Q18PE1 504 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 CT47A1Q5JQC4 288 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-208ENST00000476724 SPECC1Q5M775 1068 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 SMARCE1Q969G3 411 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 ZC3H12CQ9C0D7 883 aaKnown RBP18.79■□□□□ 0.6
TMEM53-208ENST00000476724 VPS54Q9P1Q0 977 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 CDK5RAP2Q96SN8 1893 aa18.79■□□□□ 0.6
TMEM53-208ENST00000476724 PSDA5PKW4 1024 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-208ENST00000476724 ARMCX5Q6P1M9 558 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 COA1Q9GZY4 146 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 SERTAD1Q9UHV2 236 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 PRDM1O75626 825 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 PLEKHA8P1O95397 391 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 GRIN1Q05586 938 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 ZNF710Q8N1W2 664 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 SH3RF3Q8TEJ3 882 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-208ENST00000476724 CSRNP2Q9H175 543 aa18.78■□□□□ 0.6
TMEM53-208ENST00000476724 FAM205AQ6ZU69 1335 aa18.77■□□□□ 0.6
TMEM53-208ENST00000476724 CCP110O43303 1012 aa18.77■□□□□ 0.6
TMEM53-208ENST00000476724 ATP1A3P13637 1013 aa18.77■□□□□ 0.6
TMEM53-208ENST00000476724 MORC3Q14149 939 aa18.77■□□□□ 0.6
TMEM53-208ENST00000476724 SPATA20Q8TB22 786 aa18.77■□□□□ 0.6
TMEM53-208ENST00000476724 ENOX1Q8TC92 643 aaKnown RBP18.77■□□□□ 0.6
TMEM53-208ENST00000476724 RTFDC1Q9BY42 306 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-208ENST00000476724 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-208ENST00000476724 USP27XA6NNY8 438 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 ACTN4O43707 911 aaKnown RBP18.77■□□□□ 0.59
TMEM53-208ENST00000476724 CYP2D6P10635 497 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 ATP2B1P20020 1258 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 CFAP100Q494V2 611 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 SHISA4Q96DD7 197 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 MXD3Q9BW11 206 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 FANCLQ9NW38 375 aa18.77■□□□□ 0.59
TMEM53-208ENST00000476724 CNTNAP5Q8WYK1 1306 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 FOXN1O15353 648 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 BMP6P22004 513 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 GSTO1P78417 241 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 ANKRD7Q92527 254 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 TSC1Q92574 1164 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
TMEM53-208ENST00000476724 KIF5BP33176 963 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 TRAPPC10P48553 1259 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 CCDC178Q5BJE1 867 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 VSTM4Q8IW00 320 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 CERS5Q8N5B7 392 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 KIF18AQ8NI77 898 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 TNFRSF25Q93038 417 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 ERCC5P28715 1186 aaPredicted RBP18.75■□□□□ 0.59
TMEM53-208ENST00000476724 TBC1D22AQ8WUA7 517 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 UBE2Q2Q8WVN8 375 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 CNKSR1Q969H4 720 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
TMEM53-208ENST00000476724 MKRN1Q9UHC7 482 aaKnown RBP18.75■□□□□ 0.59
TMEM53-208ENST00000476724 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 USP17L8P0C7I0 530 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms