RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 COL11A1P12107 1806 aaPredicted RBP16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 PTPREP23469 700 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 PRO3102Q9H379 93 aa16.1■□□□□ 0.17
HMGCS2-203ENST00000476640 RANBP2P49792 3224 aaKnown RBP16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 STRNO43815 780 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 MSCO60682 206 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 HOXC6P09630 235 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 ICA1Q05084 483 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 CCL14Q16627 93 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 BTBD7Q9P203 1132 aa16.09■□□□□ 0.17
HMGCS2-203ENST00000476640 CYP2D6P10635 497 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 GRB14Q14449 540 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 C12orf60Q5U649 245 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 SHCBP1Q8NEM2 672 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 SLC4A4Q9Y6R1 1079 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.16
HMGCS2-203ENST00000476640 A0A1W2PRG0 241 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 USP17L21D6R901 530 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 PRKAB2O43741 272 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 CCND3P30281 292 aaPredicted RBP16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 CDK8P49336 464 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 STAP2Q9UGK3 403 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 MYH4Q9Y623 1939 aa16.07■□□□□ 0.16
HMGCS2-203ENST00000476640 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 FLOT1O75955 427 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 CNGA1P29973 690 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 BMP8BP34820 402 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 EVX2Q03828 476 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 LHX8Q68G74 356 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 MROH8Q9H579 483 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
HMGCS2-203ENST00000476640 COL6A1P12109 1028 aa16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 AKR1B1P15121 316 aa16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 DSG3P32926 999 aa16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 PLS1Q14651 629 aa16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 LRRFIP1Q32MZ4 808 aaKnown RBP16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 DDX20Q9UHI6 824 aaKnown RBP16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 GREB1LQ9C091 1923 aaPredicted RBP16.05■□□□□ 0.16
HMGCS2-203ENST00000476640 PFASO15067 1338 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 SMARCA5O60264 1052 aaPredicted RBP16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 SLC25A27O95847 323 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 ERCC3P19447 782 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 ADORA2AP29274 412 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 ABRAQ8N0Z2 381 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 GDF15Q99988 308 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
HMGCS2-203ENST00000476640 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 ZFYP08048 801 aaPredicted RBP16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 KBTBD3Q8NAB2 608 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 NPLOC4Q8TAT6 608 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 ZNF287Q9HBT7 754 aa16.03■□□□□ 0.16
HMGCS2-203ENST00000476640 FCER1AP12319 257 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 GNAT2P19087 354 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 CYP2C19P33261 490 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 COPB2P35606 906 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 SBK1Q52WX2 424 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 SIAH1Q8IUQ4 282 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 ARRDC4Q8NCT1 418 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 ATG4CQ96DT6 458 aa16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.16
HMGCS2-203ENST00000476640 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.15
HMGCS2-203ENST00000476640 DNM1LO00429 736 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 RAD21O60216 631 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 CYBAP13498 195 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 SYN1P17600 705 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 KIAA1755Q5JYT7 1200 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 APPBP2Q92624 585 aa16.01■□□□□ 0.15
HMGCS2-203ENST00000476640 MKNK2Q9HBH9 465 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms