RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 CHST3Q7LGC8 479 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
LSG1-207ENST00000475763 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
LSG1-207ENST00000475763 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 EHD4Q9H223 541 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 DDX4Q9NQI0 724 aaKnown RBP13.15□□□□□ -0.3
LSG1-207ENST00000475763 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
LSG1-207ENST00000475763 MYH8P13535 1937 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
LSG1-207ENST00000475763 LARGE1O95461 756 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
LSG1-207ENST00000475763 PLCD1P51178 756 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 RCAN1P53805 252 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 PICALMQ13492 652 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
LSG1-207ENST00000475763 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 MKNK2Q9HBH9 465 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 ATRNL1Q5VV63 1379 aa13.14□□□□□ -0.31
LSG1-207ENST00000475763 NID2Q14112 1375 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 MYO1BO43795 1136 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
LSG1-207ENST00000475763 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
LSG1-207ENST00000475763 NUCB2P80303 420 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 GABPAQ06546 454 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 NFIAQ12857 509 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 WTAPQ15007 396 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
LSG1-207ENST00000475763 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
LSG1-207ENST00000475763 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
LSG1-207ENST00000475763 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 TCP11L1Q9NUJ3 509 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
LSG1-207ENST00000475763 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 PRDM1O75626 825 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
LSG1-207ENST00000475763 GGCXP38435 758 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 CDK8P49336 464 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
LSG1-207ENST00000475763 ST3GAL1Q11201 340 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 SEC23AQ15436 765 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 GPC2Q8N158 579 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
LSG1-207ENST00000475763 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
LSG1-207ENST00000475763 TNKSO95271 1327 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
LSG1-207ENST00000475763 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 GFRA3O60609 400 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 RASA1P20936 1047 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 TFAP4Q01664 338 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 SCRN1Q12765 414 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
LSG1-207ENST00000475763 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
LSG1-207ENST00000475763 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
LSG1-207ENST00000475763 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
LSG1-207ENST00000475763 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
LSG1-207ENST00000475763 H7C1D1 291 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 WNT10BO00744 389 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 SOCS7O14512 581 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 ZBTB43O43298 467 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 HMGN5P82970 282 aaKnown RBP13.1□□□□□ -0.31
LSG1-207ENST00000475763 STK3Q13188 491 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
LSG1-207ENST00000475763 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
LSG1-207ENST00000475763 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
LSG1-207ENST00000475763 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms