RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 GJB1P08034 283 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 GNAT2P19087 354 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 ERVK-9P63128 1117 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 ERVK-24P63145 666 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 UBXN2AP68543 259 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 TICAM2Q86XR7 235 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 SHISA4Q96DD7 197 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 EPB41L4AQ9HCS5 686 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-203ENST00000475482 TMX2Q9Y320 296 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
CPSF3-203ENST00000475482 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 HIP1O00291 1037 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 MYCP01106 439 aaPredicted RBP18.6■□□□□ 0.57
CPSF3-203ENST00000475482 CCL5P13501 91 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 ELNP15502 786 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 GJA8P48165 433 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 KIAA1755Q5JYT7 1200 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 ZMYM1Q5SVZ6 1142 aa18.6■□□□□ 0.57
CPSF3-203ENST00000475482 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.6■□□□□ 0.57
CPSF3-203ENST00000475482 PATL2C9JE40 543 aaKnown RBP18.59■□□□□ 0.57
CPSF3-203ENST00000475482 MAPK4P31152 587 aa18.59■□□□□ 0.57
CPSF3-203ENST00000475482 LPAR1Q92633 364 aa18.59■□□□□ 0.57
CPSF3-203ENST00000475482 USP6NLQ92738 828 aa18.59■□□□□ 0.57
CPSF3-203ENST00000475482 PORCNQ9H237 461 aa18.59■□□□□ 0.57
CPSF3-203ENST00000475482 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
CPSF3-203ENST00000475482 A0A0G2JMZ2 1700 aa18.59■□□□□ 0.57
CPSF3-203ENST00000475482 SPDYE16A6NNV3 312 aaPredicted RBP18.58■□□□□ 0.56
CPSF3-203ENST00000475482 INHAP05111 366 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 XRCC5P13010 732 aaKnown RBP18.58■□□□□ 0.56
CPSF3-203ENST00000475482 RASA1P20936 1047 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 ICA1Q05084 483 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 PRPF38BQ5VTL8 546 aaKnown RBP18.58■□□□□ 0.56
CPSF3-203ENST00000475482 UBE2Q1Q7Z7E8 422 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 CLEC10AQ8IUN9 316 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 SEC62Q99442 399 aaKnown RBP18.58■□□□□ 0.56
CPSF3-203ENST00000475482 FSD1Q9BTV5 496 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 RNF208Q9H0X6 261 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 UNC93B1Q9H1C4 597 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.56
CPSF3-203ENST00000475482 REC8O95072 547 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 MORN1Q5T089 497 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 SOCS4Q8WXH5 440 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 VCPKMTQ9H867 229 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 ARHGEF10LQ9HCE6 1279 aa18.57■□□□□ 0.56
CPSF3-203ENST00000475482 PAK6Q9NQU5 681 aaPredicted RBP18.57■□□□□ 0.56
CPSF3-203ENST00000475482 BIN2Q9UBW5 565 aaPredicted RBP18.57■□□□□ 0.56
CPSF3-203ENST00000475482 FOXP2O15409 715 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 CAPN2P17655 700 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 COG2Q14746 738 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 GPR142Q7Z601 462 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 NUDT12Q9BQG2 462 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 PAGR1Q9BTK6 254 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 BTBD7Q9P203 1132 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 CEP290O15078 2479 aa18.56■□□□□ 0.56
CPSF3-203ENST00000475482 SGPL1O95470 568 aa18.55■□□□□ 0.56
CPSF3-203ENST00000475482 HMGCRP04035 888 aa18.55■□□□□ 0.56
CPSF3-203ENST00000475482 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
CPSF3-203ENST00000475482 ANP32AP39687 249 aaKnown RBP18.55■□□□□ 0.56
CPSF3-203ENST00000475482 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
CPSF3-203ENST00000475482 CCNA1P78396 465 aa18.55■□□□□ 0.56
CPSF3-203ENST00000475482 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
CPSF3-203ENST00000475482 U2AF1L4Q8WU68 220 aaKnown RBP18.55■□□□□ 0.56
CPSF3-203ENST00000475482 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
CPSF3-203ENST00000475482 IGKV6D-41A0A0C4DH26 115 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 MINDY4BA8MYZ0 360 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 CHMLP26374 656 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 DSG3P32926 999 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 MAP3K21Q5TCX8 1036 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 TRIB2Q92519 343 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 CRISPLD2Q9H0B8 497 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 ADAMTS5Q9UNA0 930 aa18.54■□□□□ 0.56
CPSF3-203ENST00000475482 MYH4Q9Y623 1939 aa18.53■□□□□ 0.56
CPSF3-203ENST00000475482 WDR46O15213 610 aaKnown RBP18.53■□□□□ 0.56
CPSF3-203ENST00000475482 TDO2P48775 406 aa18.53■□□□□ 0.56
CPSF3-203ENST00000475482 NACAP1Q9BZK3 213 aa18.53■□□□□ 0.56
CPSF3-203ENST00000475482 NYAP2Q9P242 653 aa18.53■□□□□ 0.56
CPSF3-203ENST00000475482 COL11A1P12107 1806 aaPredicted RBP18.52■□□□□ 0.56
CPSF3-203ENST00000475482 EPB41L2O43491 1005 aaKnown RBP18.52■□□□□ 0.56
CPSF3-203ENST00000475482 SEC24BO95487 1268 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 APPP05067 770 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 CYP2B6P20813 491 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 TRIM32Q13049 653 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 TRMT44Q8IYL2 757 aaKnown RBP18.52■□□□□ 0.56
CPSF3-203ENST00000475482 SPICE1Q8N0Z3 855 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 MB21D1Q8N884 522 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
CPSF3-203ENST00000475482 PLIN4Q96Q06 1357 aa18.52■□□□□ 0.55
CPSF3-203ENST00000475482 RPTORQ8N122 1335 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 IGHA2P01877 340 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 HOXC6P09630 235 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 PTPREP23469 700 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms