RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 U2AF2P26368 475 aaKnown RBP eCLIP22.87■■□□□ 1.252e-7■■□□□ 13.1
SSR1-204ENST00000474597 DIS3L2Q8IYB7 885 aaKnown RBP22.87■■□□□ 1.25
SSR1-204ENST00000474597 CSRNP1Q96S65 589 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 FTOQ9C0B1 505 aaKnown RBP eCLIP22.87■■□□□ 1.256e-16■□□□□ 10.2
SSR1-204ENST00000474597 DNAJC18Q9H819 358 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 VPS54Q9P1Q0 977 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 RCOR1Q9UKL0 485 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 MYH4Q9Y623 1939 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 BAZ2BQ9UIF8 2168 aaKnown RBP22.86■■□□□ 1.25
SSR1-204ENST00000474597 FAM196BA6NMK8 535 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 FAM151AQ8WW52 585 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 MYOZ2Q9NPC6 264 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 RTEL1Q9NZ71 1219 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 CLIP2Q9UDT6 1046 aa22.86■■□□□ 1.25
SSR1-204ENST00000474597 GREB1LQ9C091 1923 aaPredicted RBP22.86■■□□□ 1.25
SSR1-204ENST00000474597 PALM3A6NDB9 673 aaPredicted RBP22.85■■□□□ 1.25
SSR1-204ENST00000474597 GOLGA6L3A6NEY3 463 aa22.85■■□□□ 1.25
SSR1-204ENST00000474597 SCG2P13521 617 aa22.85■■□□□ 1.25
SSR1-204ENST00000474597 PIBF1Q8WXW3 757 aa22.85■■□□□ 1.25
SSR1-204ENST00000474597 FOXP1Q9H334 677 aaPredicted RBP22.85■■□□□ 1.25
SSR1-204ENST00000474597 BRMS1Q9HCU9 246 aa22.85■■□□□ 1.25
SSR1-204ENST00000474597 PFKFB3Q16875 520 aaPredicted RBP22.85■■□□□ 1.25
SSR1-204ENST00000474597 LRRC47Q8N1G4 583 aaKnown RBP22.85■■□□□ 1.25
SSR1-204ENST00000474597 BTBD18B2RXH4 712 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 KLRF2D3W0D1 207 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 SLURP2P0DP57 97 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 ATP2B2Q01814 1243 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 STK38Q15208 465 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 FKBP1CQ5VVH2 108 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 TATDN1Q6P1N9 297 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 NOSTRINQ8IVI9 506 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 BICD2Q8TD16 824 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 POLR3EQ9NVU0 708 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 GJA3Q9Y6H8 435 aa22.84■■□□□ 1.25
SSR1-204ENST00000474597 YEATS4O95619 227 aa22.83■■□□□ 1.25
SSR1-204ENST00000474597 GOLGA8HP0CJ92 632 aa22.83■■□□□ 1.25
SSR1-204ENST00000474597 CCDC183Q5T5S1 534 aa22.83■■□□□ 1.25
SSR1-204ENST00000474597 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
SSR1-204ENST00000474597 METTL16Q86W50 562 aaKnown RBP22.83■■□□□ 1.25
SSR1-204ENST00000474597 HERC5Q9UII4 1024 aaKnown RBP22.83■■□□□ 1.25
SSR1-204ENST00000474597 FZD9O00144 591 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 WNT10BO00744 389 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 KRT2P35908 639 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 ZNF445P59923 1031 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 SF3A1Q15459 793 aaKnown RBP22.82■■□□□ 1.24
SSR1-204ENST00000474597 CLEC10AQ8IUN9 316 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 KCNG4Q8TDN1 519 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 PHF20Q9BVI0 1012 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.82■■□□□ 1.24
SSR1-204ENST00000474597 ISY1Q9ULR0 285 aaKnown RBP22.82■■□□□ 1.24
SSR1-204ENST00000474597 CLIC4Q9Y696 253 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 ME1P48163 572 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 ANO1Q5XXA6 986 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 ARHGAP27Q6ZUM4 889 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 TMEM179Q6ZVK1 233 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
SSR1-204ENST00000474597 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
SSR1-204ENST00000474597 PDHBP11177 359 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 TNNI2P48788 182 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 NASPP49321 788 aaPredicted RBP22.81■■□□□ 1.24
SSR1-204ENST00000474597 NLRP5P59047 1200 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 ABCB5Q2M3G0 1257 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 ASPRV1Q53RT3 343 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 RBM26Q5T8P6 1007 aaKnown RBP22.81■■□□□ 1.24
SSR1-204ENST00000474597 FAM83AQ86UY5 434 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 LINC00301Q8NCQ3 95 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 ZBED3Q96IU2 234 aaPredicted RBP22.81■■□□□ 1.24
SSR1-204ENST00000474597 PGBD1Q96JS3 809 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 SPZ1Q9BXG8 430 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 CABP5Q9NP86 173 aa22.81■■□□□ 1.24
SSR1-204ENST00000474597 USP17L5A8MUK1 530 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 GMPSP49915 693 aaPredicted RBP22.8■■□□□ 1.24
SSR1-204ENST00000474597 ZNF280AP59817 542 aaPredicted RBP22.8■■□□□ 1.24
SSR1-204ENST00000474597 NBPF9Q3BBW0 867 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 L1TD1Q5T7N2 865 aaKnown RBP22.8■■□□□ 1.24
SSR1-204ENST00000474597 DPF2Q92785 391 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 CNTNAP1P78357 1384 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 SYCE3A1L190 88 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 GDF11O95390 407 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 SMARCA1P28370 1054 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 PRELPP51888 382 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 RASGRP2Q7LDG7 609 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 SH3GLB2Q9NR46 395 aa22.8■■□□□ 1.24
SSR1-204ENST00000474597 FRMPD2Q68DX3 1309 aaPredicted RBP22.79■■□□□ 1.24
SSR1-204ENST00000474597 SHTN1A0MZ66 631 aa22.79■■□□□ 1.24
SSR1-204ENST00000474597 SPTLC2O15270 562 aa22.79■■□□□ 1.24
SSR1-204ENST00000474597 LETM1O95202 739 aaPredicted RBP22.79■■□□□ 1.24
SSR1-204ENST00000474597 NR5A1Q13285 461 aa22.79■■□□□ 1.24
SSR1-204ENST00000474597 MICALL2Q8IY33 904 aa22.79■■□□□ 1.24
SSR1-204ENST00000474597 NYAP2Q9P242 653 aa22.79■■□□□ 1.24
SSR1-204ENST00000474597 CYTH3O43739 400 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 CALML3P27482 149 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 ICA1Q05084 483 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 RILPL1Q5EBL4 403 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 OXER1Q8TDS5 423 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 RRP36Q96EU6 259 aaKnown RBP22.78■■□□□ 1.24
SSR1-204ENST00000474597 SEC63Q9UGP8 760 aaKnown RBP22.78■■□□□ 1.24
SSR1-204ENST00000474597 DICER1Q9UPY3 1922 aaKnown RBP22.78■■□□□ 1.24
SSR1-204ENST00000474597 FSD2A1L4K1 749 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 SEPT2Q15019 361 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms