RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 PRDM1O75626 825 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 FGAP02671 866 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 VCAM1P19320 739 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 HOXD10P28358 340 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 PSMC4P43686 418 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 ANKRD13CQ8N6S4 541 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
RNF220-210ENST00000474394 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 ZMYM6O95789 1325 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
RNF220-210ENST00000474394 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
RNF220-210ENST00000474394 FCGRTP55899 365 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 HERVK_113P62684 666 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 SIAH1Q8IUQ4 282 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 LPAR1Q92633 364 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
RNF220-210ENST00000474394 COL25A1Q9BXS0 654 aaPredicted RBP12.78□□□□□ -0.36
RNF220-210ENST00000474394 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
RNF220-210ENST00000474394 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
RNF220-210ENST00000474394 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
RNF220-210ENST00000474394 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 PRMT2P55345 433 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 NEDD1Q8NHV4 660 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 TRIM47Q96LD4 638 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.77□□□□□ -0.37
RNF220-210ENST00000474394 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
RNF220-210ENST00000474394 GOPCQ9HD26 462 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 NYAP2Q9P242 653 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
RNF220-210ENST00000474394 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 RAD50Q92878 1312 aa12.77□□□□□ -0.37
RNF220-210ENST00000474394 CHMLP26374 656 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 CTGFP29279 349 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 TFAP4Q01664 338 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 SH3TC2Q8TF17 1288 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
RNF220-210ENST00000474394 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
RNF220-210ENST00000474394 IGKV6D-41A0A0C4DH26 115 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 TSPY2A6NKD2 308 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
RNF220-210ENST00000474394 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
RNF220-210ENST00000474394 ORC4O43929 436 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 RAD21O60216 631 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
RNF220-210ENST00000474394 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
RNF220-210ENST00000474394 HAND2P61296 217 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 SPICE1Q8N0Z3 855 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 COA7Q96BR5 231 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 CTNNA3Q9UI47 895 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
RNF220-210ENST00000474394 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 ZNF213O14771 459 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 TTLL1O95922 423 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 FGRP09769 529 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 COG2Q14746 738 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
RNF220-210ENST00000474394 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 GPR153Q6NV75 609 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 MFSD6Q6ZSS7 791 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 CCAR1Q8IX12 1150 aaKnown RBP12.74□□□□□ -0.37
RNF220-210ENST00000474394 NKX2-3Q8TAU0 364 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
RNF220-210ENST00000474394 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms