RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 FAM173BQ6P4H8 233 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 GPC2Q8N158 579 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 SCAND2PQ9GZW5 306 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-206ENST00000473869 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 MAD2L2Q9UI95 211 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 CFAP45Q9UL16 551 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 EGFRP00533 1210 aa12.55□□□□□ -0.4
TARDBP-206ENST00000473869 LRRC47Q8N1G4 583 aaKnown RBP12.55□□□□□ -0.4
TARDBP-206ENST00000473869 STAG2Q8N3U4 1231 aa12.55□□□□□ -0.4
TARDBP-206ENST00000473869 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-206ENST00000473869 GREB1LQ9C091 1923 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-206ENST00000473869 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
TARDBP-206ENST00000473869 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-206ENST00000473869 KIF23Q02241 960 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-206ENST00000473869 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 TFIP11Q9UBB9 837 aaKnown RBP12.54□□□□□ -0.4
TARDBP-206ENST00000473869 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 TBC1D12O60347 775 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-206ENST00000473869 GDF11O95390 407 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 MBD3O95983 291 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 RASA3Q14644 834 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 PKN1Q16512 942 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 NYAP2Q9P242 653 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 MYH15Q9Y2K3 1946 aa12.54□□□□□ -0.4
TARDBP-206ENST00000473869 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 MMP1P03956 469 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 PDHBP11177 359 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 SCG2P13521 617 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 ICA1Q05084 483 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 SEPT2Q15019 361 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 ASPRV1Q53RT3 343 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
TARDBP-206ENST00000473869 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 GH2P01242 217 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.4
TARDBP-206ENST00000473869 SMARCA1P28370 1054 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 PFKFB3Q16875 520 aaPredicted RBP12.52□□□□□ -0.4
TARDBP-206ENST00000473869 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 KCNJ14Q9UNX9 436 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 ELP1O95163 1332 aa12.52□□□□□ -0.4
TARDBP-206ENST00000473869 KIF28PB7ZC32 967 aa12.52□□□□□ -0.41
TARDBP-206ENST00000473869 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.412e-10■□□□□ 10.5
TARDBP-206ENST00000473869 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-206ENST00000473869 UBE2HP62256 183 aa12.52□□□□□ -0.41
TARDBP-206ENST00000473869 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-206ENST00000473869 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
TARDBP-206ENST00000473869 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
TARDBP-206ENST00000473869 MKL1Q969V6 931 aa12.52□□□□□ -0.41
TARDBP-206ENST00000473869 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-206ENST00000473869 BRMS1Q9HCU9 246 aa12.52□□□□□ -0.41
TARDBP-206ENST00000473869 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 RAD21O60216 631 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 SNHG28P0DPA3 235 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 CEBPZQ03701 1054 aaKnown RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 APOBEC3FQ8IUX4 373 aaKnown RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
TARDBP-206ENST00000473869 SCAF8Q9UPN6 1271 aaKnown RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 FRMPD2Q68DX3 1309 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-206ENST00000473869 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms