RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 RASIP1Q5U651 963 aa19.91■□□□□ 0.78
HPS4-210ENST00000473782 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.91■□□□□ 0.78
HPS4-210ENST00000473782 TRIM34Q9BYJ4 488 aa19.91■□□□□ 0.78
HPS4-210ENST00000473782 PBX4Q9BYU1 374 aa19.91■□□□□ 0.78
HPS4-210ENST00000473782 PRDM12Q9H4Q4 367 aa19.91■□□□□ 0.78
HPS4-210ENST00000473782 SNRKQ9NRH2 765 aa19.91■□□□□ 0.78
HPS4-210ENST00000473782 SMCHD1A6NHR9 2005 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 PQBP1O60828 265 aaKnown RBP19.9■□□□□ 0.78
HPS4-210ENST00000473782 CYP2E1P05181 493 aaPredicted RBP19.9■□□□□ 0.78
HPS4-210ENST00000473782 MRPS5P82675 430 aaKnown RBP19.9■□□□□ 0.78
HPS4-210ENST00000473782 MTX1Q13505 466 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 ANKRD33Q7Z3H0 272 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 SHCBP1Q8NEM2 672 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 MAML3Q96JK9 1138 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 NECAB3Q96P71 396 aaPredicted RBP19.9■□□□□ 0.78
HPS4-210ENST00000473782 SPATC1LQ9H0A9 340 aa19.9■□□□□ 0.78
HPS4-210ENST00000473782 A0A1W2PQ45 241 aaPredicted RBP19.89■□□□□ 0.77
HPS4-210ENST00000473782 A0A1W2PQY0 241 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 A0A1W2PRG0 241 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 SRGAP3O43295 1099 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 PGK1P00558 417 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 HLA-DOAP06340 250 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 RAB3GAP1Q15042 981 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 ALDH1L2Q3SY69 923 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 KIAA1755Q5JYT7 1200 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 NOL10Q9BSC4 688 aaKnown RBP19.89■□□□□ 0.77
HPS4-210ENST00000473782 TMEM39AQ9NV64 488 aa19.89■□□□□ 0.77
HPS4-210ENST00000473782 TMEM240Q5SV17 173 aa19.88■□□□□ 0.77
HPS4-210ENST00000473782 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
HPS4-210ENST00000473782 GAS2L1Q99501 681 aaPredicted RBP19.88■□□□□ 0.77
HPS4-210ENST00000473782 XPNPEP3Q9NQH7 507 aa19.88■□□□□ 0.77
HPS4-210ENST00000473782 MYO9BQ13459 2157 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 UQCRFS1P1P0C7P4 283 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 BMP1P13497 986 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 TAL1P17542 331 aaPredicted RBP19.87■□□□□ 0.77
HPS4-210ENST00000473782 SHMT1P34896 483 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 COG2Q14746 738 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 CCDC85BQ15834 202 aaPredicted RBP19.87■□□□□ 0.77
HPS4-210ENST00000473782 ABRAQ8N0Z2 381 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 TOX2Q96NM4 488 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 EHD4Q9H223 541 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 TBX21Q9UL17 535 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 A0A0G2JMZ2 1700 aa19.87■□□□□ 0.77
HPS4-210ENST00000473782 SYNGAP1Q96PV0 1343 aa19.86■□□□□ 0.77
HPS4-210ENST00000473782 TIMP1P01033 207 aa19.86■□□□□ 0.77
HPS4-210ENST00000473782 ABCB5Q2M3G0 1257 aa19.86■□□□□ 0.77
HPS4-210ENST00000473782 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
HPS4-210ENST00000473782 LENG1Q96BZ8 264 aaPredicted RBP19.86■□□□□ 0.77
HPS4-210ENST00000473782 PIH1D3Q9NQM4 214 aaKnown RBP19.86■□□□□ 0.77
HPS4-210ENST00000473782 SERPINB13Q9UIV8 391 aa19.86■□□□□ 0.77
HPS4-210ENST00000473782 NOB1Q9ULX3 412 aaKnown RBP19.86■□□□□ 0.77
HPS4-210ENST00000473782 ADAMTS4O75173 837 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 ZNF865P0CJ78 1059 aaPredicted RBP19.85■□□□□ 0.77
HPS4-210ENST00000473782 PLCD1P51178 756 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 ATF7IPQ6VMQ6 1270 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 SLC44A5Q8NCS7 719 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 SMC4Q9NTJ3 1288 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 HOXC10Q9NYD6 342 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 HDAC5Q9UQL6 1122 aa19.85■□□□□ 0.77
HPS4-210ENST00000473782 MYO5AQ9Y4I1 1855 aaKnown RBP19.85■□□□□ 0.77
HPS4-210ENST00000473782 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 RARBP10826 455 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 EVX2Q03828 476 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 SEPT2Q15019 361 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 CCSAPQ6IQ19 270 aaPredicted RBP19.84■□□□□ 0.77
HPS4-210ENST00000473782 MFSD5Q6N075 450 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 MROH8Q9H579 483 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 NRBP1Q9UHY1 535 aa19.84■□□□□ 0.77
HPS4-210ENST00000473782 ROBO3Q96MS0 1386 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 DSG3P32926 999 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 GABPAQ06546 454 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 RNF180Q86T96 592 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 DBNDD2Q9BQY9 259 aa19.83■□□□□ 0.77
HPS4-210ENST00000473782 PNMA6EA0A0J9YXQ4 647 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 E9PSI1 815 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 CYP7A1P22680 504 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 ZAP70P43403 619 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 CDK7P50613 346 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 MIGA1Q8NAN2 632 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 KLHDC9Q8NEP7 349 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 TSEN34Q9BSV6 310 aaKnown RBP19.82■□□□□ 0.76
HPS4-210ENST00000473782 SLC5A4Q9NY91 659 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 CXXC1Q9P0U4 656 aaPredicted RBP19.82■□□□□ 0.76
HPS4-210ENST00000473782 ARIH1Q9Y4X5 557 aaPredicted RBP19.82■□□□□ 0.76
HPS4-210ENST00000473782 MYH1P12882 1939 aa19.82■□□□□ 0.76
HPS4-210ENST00000473782 CSF2RAP15509 400 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 ACLYP53396 1101 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 IRX5P78411 483 aaPredicted RBP19.81■□□□□ 0.76
HPS4-210ENST00000473782 ZNF792Q3KQV3 632 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 NCAPG2Q86XI2 1143 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 SIAH1Q8IUQ4 282 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 ATG4CQ96DT6 458 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 CDCA7LQ96GN5 454 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 LRFN3Q9BTN0 628 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 C1QTNF1Q9BXJ1 281 aa19.81■□□□□ 0.76
HPS4-210ENST00000473782 TCF20Q9UGU0 1960 aaKnown RBP19.81■□□□□ 0.76
HPS4-210ENST00000473782 DCDC2CA8MYV0 355 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms