RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
MRPL55-226ENST00000473066 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
MRPL55-226ENST00000473066 RABGAP1Q9Y3P9 1069 aa18.59■□□□□ 0.57
MRPL55-226ENST00000473066 COL11A1P12107 1806 aaPredicted RBP18.58■□□□□ 0.57
MRPL55-226ENST00000473066 RAD21O60216 631 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 PDE4BQ07343 736 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 ZNF444Q8N0Y2 327 aaPredicted RBP18.58■□□□□ 0.56
MRPL55-226ENST00000473066 PXYLP1Q8TE99 480 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 TXNRD2Q9NNW7 524 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 RBPJLQ9UBG7 517 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 TMX2Q9Y320 296 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 RLFQ13129 1914 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 HTTP42858 3142 aa18.58■□□□□ 0.56
MRPL55-226ENST00000473066 SPDYE16A6NNV3 312 aaPredicted RBP18.57■□□□□ 0.56
MRPL55-226ENST00000473066 WDR46O15213 610 aaKnown RBP18.57■□□□□ 0.56
MRPL55-226ENST00000473066 EEF2P13639 858 aaKnown RBP18.57■□□□□ 0.56
MRPL55-226ENST00000473066 ELNP15502 786 aa18.57■□□□□ 0.56
MRPL55-226ENST00000473066 RASA1P20936 1047 aa18.57■□□□□ 0.56
MRPL55-226ENST00000473066 WDR78Q5VTH9 848 aa18.57■□□□□ 0.56
MRPL55-226ENST00000473066 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
MRPL55-226ENST00000473066 PPARAQ07869 468 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 COG2Q14746 738 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
MRPL55-226ENST00000473066 LBX2Q6XYB7 198 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 NUDT12Q9BQG2 462 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
MRPL55-226ENST00000473066 PEX10O60683 326 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 PRDM1O75626 825 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 FLOT1O75955 427 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 INHAP05111 366 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 CCL5P13501 91 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 EN2P19622 333 aaPredicted RBP18.55■□□□□ 0.56
MRPL55-226ENST00000473066 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
MRPL55-226ENST00000473066 MTFR1Q15390 333 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 MCMDC2Q4G0Z9 681 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 OSBPL3Q9H4L5 887 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 IVNS1ABPQ9Y6Y0 642 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 LAMA4Q16363 1823 aa18.55■□□□□ 0.56
MRPL55-226ENST00000473066 A0A0D9SFI3 127 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 HMGCRP04035 888 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 TSPY3P0CV98 308 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 TSPY8P0CW00 308 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 NMIQ13287 307 aaPredicted RBP18.54■□□□□ 0.56
MRPL55-226ENST00000473066 GPR142Q7Z601 462 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 MB21D1Q8N884 522 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 PORCNQ9H237 461 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
MRPL55-226ENST00000473066 CCDC171Q6TFL3 1326 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 HIP1O00291 1037 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 CYP2B6P20813 491 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 RGS2P41220 211 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 Q3C1V9 767 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 PPP4R3BQ5MIZ7 849 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
MRPL55-226ENST00000473066 NYAP2Q9P242 653 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 PLIN4Q96Q06 1357 aa18.53■□□□□ 0.56
MRPL55-226ENST00000473066 CNMDO75829 334 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 GJB1P08034 283 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 APBA2Q99767 749 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 UNC93B1Q9H1C4 597 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 BTBD7Q9P203 1132 aa18.52■□□□□ 0.56
MRPL55-226ENST00000473066 ZNFX1Q9P2E3 1918 aaKnown RBP18.51■□□□□ 0.55
MRPL55-226ENST00000473066 ZKSCAN1P17029 563 aaPredicted RBP18.51■□□□□ 0.55
MRPL55-226ENST00000473066 SDSP20132 328 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 DSG3P32926 999 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 PLS1Q14651 629 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 ATG4CQ96DT6 458 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
MRPL55-226ENST00000473066 TOMM22Q9NS69 142 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 GJD2Q9UKL4 321 aa18.51■□□□□ 0.55
MRPL55-226ENST00000473066 TSPY2A6NKD2 308 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 TTLL1O95922 423 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 ALX1Q15699 326 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 NEDD1Q8NHV4 660 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 CEP95Q96GE4 821 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 SPATC1LQ9H0A9 340 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 CLIP2Q9UDT6 1046 aa18.5■□□□□ 0.55
MRPL55-226ENST00000473066 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
MRPL55-226ENST00000473066 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 IGKV6D-41A0A0C4DH26 115 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 SLC15A5A6NIM6 579 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 XRCC5P13010 732 aaKnown RBP18.49■□□□□ 0.55
MRPL55-226ENST00000473066 GJA8P48165 433 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 TFAP4Q01664 338 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 MAP2K5Q13163 448 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
MRPL55-226ENST00000473066 SHCBP1Q8NEM2 672 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms