RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MKL1Q969V6 931 aa18.1■□□□□ 0.49
SDC3-203ENST00000471567 CEP95Q96GE4 821 aa18.1■□□□□ 0.49
SDC3-203ENST00000471567 CPA4Q9UI42 421 aa18.1■□□□□ 0.49
SDC3-203ENST00000471567 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
SDC3-203ENST00000471567 TTLL1O95922 423 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 ARHGEF6Q15052 776 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 CATSPERGQ6ZRH7 1159 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 CTU1Q7Z7A3 348 aaKnown RBP18.09■□□□□ 0.49
SDC3-203ENST00000471567 TBC1D10CQ8IV04 446 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 GTF3C2Q8WUA4 911 aaPredicted RBP18.09■□□□□ 0.49
SDC3-203ENST00000471567 MAP4K1Q92918 833 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 GOPCQ9HD26 462 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 TOMM22Q9NS69 142 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
SDC3-203ENST00000471567 KIF22Q14807 665 aa18.08■□□□□ 0.48
SDC3-203ENST00000471567 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
SDC3-203ENST00000471567 P2RX7Q99572 595 aaKnown RBP18.08■□□□□ 0.48
SDC3-203ENST00000471567 RPAP3Q9H6T3 665 aaPredicted RBP18.08■□□□□ 0.48
SDC3-203ENST00000471567 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
SDC3-203ENST00000471567 WDR46O15213 610 aaKnown RBP18.07■□□□□ 0.48
SDC3-203ENST00000471567 NOVP48745 357 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 HERVK_113P62684 666 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 LACTBP83111 547 aaPredicted RBP18.07■□□□□ 0.48
SDC3-203ENST00000471567 FAM110CQ1W6H9 321 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 KIAA1755Q5JYT7 1200 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 CD99L2Q8TCZ2 262 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 ESR2Q92731 530 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
SDC3-203ENST00000471567 PKN2Q16513 984 aaKnown RBP18.06■□□□□ 0.48
SDC3-203ENST00000471567 KRT23Q9C075 422 aa18.06■□□□□ 0.48
SDC3-203ENST00000471567 LSG1Q9H089 658 aaKnown RBP18.06■□□□□ 0.48
SDC3-203ENST00000471567 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
SDC3-203ENST00000471567 F5H6K3 240 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 GNRH1P01148 92 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 KLRC3Q07444 240 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 COG2Q14746 738 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 LBX2Q6XYB7 198 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 SPICE1Q8N0Z3 855 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 ANKRD13CQ8N6S4 541 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 EFCC1Q9HA90 598 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 HOXC10Q9NYD6 342 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 MORF4L1Q9UBU8 362 aa18.05■□□□□ 0.48
SDC3-203ENST00000471567 NEDD4P46934 1319 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 CYP21A2P08686 494 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 CCDC178Q5BJE1 867 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 TTC14Q96N46 770 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
SDC3-203ENST00000471567 RBM8AQ9Y5S9 174 aaKnown RBP18.04■□□□□ 0.48
SDC3-203ENST00000471567 MYPNQ86TC9 1320 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 NMT2O60551 498 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 NDUFB10O96000 172 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 OTOP1Q7RTM1 612 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 RBPJLQ9UBG7 517 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 TRIM17Q9Y577 477 aa18.03■□□□□ 0.48
SDC3-203ENST00000471567 SPDYE16A6NNV3 312 aaPredicted RBP18.02■□□□□ 0.48
SDC3-203ENST00000471567 B4E1Z4 1266 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 RAD21O60216 631 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 KDM4AO75164 1064 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 HOXD10P28358 340 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 DSG3P32926 999 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 PSMC4P43686 418 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 FCGRTP55899 365 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 TRDNQ13061 729 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 IQCA1Q86XH1 822 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
SDC3-203ENST00000471567 GPRC5AQ8NFJ5 357 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 MCOLN1Q9GZU1 580 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 ZSWIM5Q9P217 1185 aa18.02■□□□□ 0.48
SDC3-203ENST00000471567 MYH4Q9Y623 1939 aa18.02■□□□□ 0.47
SDC3-203ENST00000471567 FLOT1O75955 427 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
SDC3-203ENST00000471567 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
SDC3-203ENST00000471567 PRMT2P55345 433 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 CAP1Q01518 475 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 FAM83BQ5T0W9 1011 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 FBXO46Q6PJ61 603 aaPredicted RBP18.01■□□□□ 0.47
SDC3-203ENST00000471567 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 DGKHQ86XP1 1220 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 NKX2-3Q8TAU0 364 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 TXNRD2Q9NNW7 524 aa18.01■□□□□ 0.47
SDC3-203ENST00000471567 E7EWF7 191 aa18■□□□□ 0.47
SDC3-203ENST00000471567 CTGFP29279 349 aa18■□□□□ 0.47
SDC3-203ENST00000471567 ERVK-9P63128 1117 aa18■□□□□ 0.47
SDC3-203ENST00000471567 ERVK-24P63145 666 aa18■□□□□ 0.47
SDC3-203ENST00000471567 NECTIN1Q15223 517 aa18■□□□□ 0.47
SDC3-203ENST00000471567 RCSD1Q6JBY9 416 aa18■□□□□ 0.47
SDC3-203ENST00000471567 ANKS1AQ92625 1134 aa18■□□□□ 0.47
SDC3-203ENST00000471567 GMCL1Q96IK5 515 aa18■□□□□ 0.47
SDC3-203ENST00000471567 TRIM47Q96LD4 638 aa18■□□□□ 0.47
SDC3-203ENST00000471567 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
SDC3-203ENST00000471567 PTPN22Q9Y2R2 807 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms