RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 RBM17Q96I25 401 aaKnown RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 KIF2CQ99661 725 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 HELLSQ9NRZ9 838 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 STK32BQ9NY57 414 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 MINPP1Q9UNW1 487 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 LRP5O75197 1615 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 UBR3Q6ZT12 1888 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 TUBGCP6Q96RT7 1819 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 RGPD3A6NKT7 1758 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 RGPD4Q7Z3J3 1758 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 A0A1W2PNR3 127 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 GOLIM4O00461 696 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 RNF113AO15541 343 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 TAF5LO75529 589 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 ATP4AP20648 1035 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 HSPA4P34932 840 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 SCNN1AP37088 669 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 FKBP4Q02790 459 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 NMIQ13287 307 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 NAA30Q147X3 362 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 EZH2Q15910 746 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 SLC15A2Q16348 729 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CRY2Q49AN0 593 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CAVIN4Q5BKX8 364 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 ZSCAN25Q6NSZ9 544 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 HSCBQ8IWL3 235 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 TRIM22Q8IYM9 498 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 SLC16A10Q8TF71 515 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CELF1Q92879 486 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 COL26A1Q96A83 441 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 ZNF775Q96BV0 537 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 GMCL1Q96IK5 515 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CRAMP1Q96RY5 1269 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 LSG1Q9H089 658 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CRISPLD1Q9H336 500 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 GNL3LQ9NVN8 582 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 C4AP0C0L4 1744 aa7.29□□□□□ -1.24
SMNDC1-204ENST00000471297 CDC14CA4D256 554 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 IGSF3O75054 1194 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 BBOX1O75936 387 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 HOXA10P31260 410 aaPredicted RBP7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 MCAMP43121 646 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 ZAP70P43403 619 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 DDR1Q08345 913 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 ZMYM1Q5SVZ6 1142 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 SV2AQ7L0J3 742 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 NANOS1Q8WY41 292 aaKnown RBP7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 KCNB2Q92953 911 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 EDC3Q96F86 508 aaKnown RBP7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 FAM227BQ96M60 508 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 BRIP1Q9BX63 1249 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 NUCKS1Q9H1E3 243 aaKnown RBP7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 LEMD3Q9Y2U8 911 aa7.28□□□□□ -1.24
SMNDC1-204ENST00000471297 PNPLA7Q6ZV29 1317 aa7.27□□□□□ -1.24
SMNDC1-204ENST00000471297 SPEF2Q9C093 1822 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 H3BM21 787 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 PDE6BP35913 854 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 PHKA1P46020 1223 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 KCNJ4P48050 445 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 MCM2P49736 904 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 NECTIN1Q15223 517 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 RTN1Q16799 776 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 SPATA5Q8NB90 893 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 MAP4K1Q92918 833 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 IL25Q9H293 177 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 SEPT3Q9UH03 358 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 DENND2AQ9ULE3 1009 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 GJA3Q9Y6H8 435 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 TNS1Q9HBL0 1735 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 CCDC171Q6TFL3 1326 aa7.27□□□□□ -1.25
SMNDC1-204ENST00000471297 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 A0A0D9SFI3 127 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 THBS1P07996 1170 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 MMP10P09238 476 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 NPR1P16066 1061 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ZKSCAN1P17029 563 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ALDH1B1P30837 517 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 PTH1RQ03431 593 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 MAP3K12Q12852 859 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 LBRQ14739 615 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 UBE3CQ15386 1083 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 COX20Q5RI15 118 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 TMED8Q6PL24 325 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 LRRC69Q6ZNQ3 347 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 C15orf52Q6ZUT6 534 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 FBXO33Q7Z6M2 555 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 VPS37DQ86XT2 251 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 APPBP2Q92624 585 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms