RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 PEX10O60683 326 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
CNOT3-206ENST00000471126 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
CNOT3-206ENST00000471126 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
CNOT3-206ENST00000471126 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
CNOT3-206ENST00000471126 SOCS4Q8WXH5 440 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 OSBP2Q969R2 916 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 DNAJC18Q9H819 358 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 ARMT1Q9H993 441 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 DCP1AQ9NPI6 582 aaPredicted RBP18.38■□□□□ 0.53
CNOT3-206ENST00000471126 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
CNOT3-206ENST00000471126 SPP2Q13103 211 aa18.37■□□□□ 0.53
CNOT3-206ENST00000471126 PABPC4Q13310 644 aaKnown RBP eCLIP18.37■□□□□ 0.532e-10■■■■□ 21.2
CNOT3-206ENST00000471126 FOXP4Q8IVH2 680 aaPredicted RBP18.37■□□□□ 0.53
CNOT3-206ENST00000471126 STRBPQ96SI9 672 aaKnown RBP18.37■□□□□ 0.53
CNOT3-206ENST00000471126 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
CNOT3-206ENST00000471126 HCN4Q9Y3Q4 1203 aa18.37■□□□□ 0.53
CNOT3-206ENST00000471126 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
CNOT3-206ENST00000471126 USP5P45974 858 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 USP6NLQ92738 828 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
CNOT3-206ENST00000471126 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 ATP8A2Q9NTI2 1148 aa18.36■□□□□ 0.53
CNOT3-206ENST00000471126 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
CNOT3-206ENST00000471126 HMGCS2P54868 508 aa18.35■□□□□ 0.53
CNOT3-206ENST00000471126 GABPAQ06546 454 aa18.35■□□□□ 0.53
CNOT3-206ENST00000471126 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
CNOT3-206ENST00000471126 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
CNOT3-206ENST00000471126 SDR42E1Q8WUS8 393 aa18.35■□□□□ 0.53
CNOT3-206ENST00000471126 NECAB3Q96P71 396 aaPredicted RBP18.35■□□□□ 0.53
CNOT3-206ENST00000471126 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
CNOT3-206ENST00000471126 M0R2C6 588 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 PRKAB2O43741 272 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 DNAJB2P25686 324 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 RGS2P41220 211 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 LRFN3Q9BTN0 628 aa18.34■□□□□ 0.53
CNOT3-206ENST00000471126 PTPRFP10586 1907 aa18.33■□□□□ 0.53
CNOT3-206ENST00000471126 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 FAM196BA6NMK8 535 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 DNM1LO00429 736 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 GPAA1O43292 621 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 PLCD1P51178 756 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 SLC39A5Q6ZMH5 540 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 TTC6Q86TZ1 520 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 ALYREFQ86V81 257 aaKnown RBP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 GPRC5AQ8NFJ5 357 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 LPAR1Q92633 364 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 SNX27Q96L92 541 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 DDX20Q9UHI6 824 aaKnown RBP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
CNOT3-206ENST00000471126 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
CNOT3-206ENST00000471126 GSG1L2A8MUP6 293 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 GSPT1P15170 499 aaKnown RBP18.32■□□□□ 0.52
CNOT3-206ENST00000471126 GNAT2P19087 354 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 MAPK4P31152 587 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 CAP2P40123 477 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 EPHB4P54760 987 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 CCDC85BQ15834 202 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-206ENST00000471126 MORN1Q5T089 497 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 SEC62Q99442 399 aaKnown RBP18.32■□□□□ 0.52
CNOT3-206ENST00000471126 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
CNOT3-206ENST00000471126 PDLIM7Q9NR12 457 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 SLC4A4Q9Y6R1 1079 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 PLXNB2O15031 1838 aa18.32■□□□□ 0.52
CNOT3-206ENST00000471126 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-206ENST00000471126 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-206ENST00000471126 FOXP2O15409 715 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 CNGA1P29973 690 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 Q3C1V9 767 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 TRIM60Q495X7 471 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 GJC2Q5T442 439 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-206ENST00000471126 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 APBA2Q99767 749 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-206ENST00000471126 HELLSQ9NRZ9 838 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 MCM9Q9NXL9 1143 aa18.31■□□□□ 0.52
CNOT3-206ENST00000471126 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
CNOT3-206ENST00000471126 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
CNOT3-206ENST00000471126 SHMT1P34896 483 aa18.3■□□□□ 0.52
CNOT3-206ENST00000471126 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-206ENST00000471126 JAG1P78504 1218 aa18.3■□□□□ 0.52
CNOT3-206ENST00000471126 EVX2Q03828 476 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms