RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 LPAR1Q92633 364 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 DCTPP1Q9H773 170 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 DDX20Q9UHI6 824 aaKnown RBP10.96□□□□□ -0.65
SF3A1-206ENST00000471037 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 DNM1LO00429 736 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 CYBAP13498 195 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 HSP90AB4PQ58FF6 505 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 WDR78Q5VTH9 848 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 ERC1Q8IUD2 1116 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 NPLOC4Q8TAT6 608 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-206ENST00000471037 NAV1Q8NEY1 1877 aa10.95□□□□□ -0.66
SF3A1-206ENST00000471037 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 STRNO43815 780 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 CYP2C19P33261 490 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-206ENST00000471037 SEPT2Q15019 361 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-206ENST00000471037 OLFML2BQ68BL8 750 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-206ENST00000471037 AACSQ86V21 672 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 SHCBP1Q8NEM2 672 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
SF3A1-206ENST00000471037 SENP6Q9GZR1 1112 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-206ENST00000471037 EXOC6BQ9Y2D4 811 aa10.94□□□□□ -0.66
SF3A1-206ENST00000471037 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 RAB11FIP3O75154 756 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 POLR3DP05423 398 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-206ENST00000471037 PDE6AP16499 860 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 COG2Q14746 738 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 TRPV1Q8NER1 839 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.93□□□□□ -0.66
SF3A1-206ENST00000471037 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
SF3A1-206ENST00000471037 SPATC1LQ9H0A9 340 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-206ENST00000471037 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 RLFQ13129 1914 aa10.93□□□□□ -0.66
SF3A1-206ENST00000471037 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 ADORA2AP29274 412 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 CNGA1P29973 690 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 RTP1P59025 263 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 EVX2Q03828 476 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 SLC9C2Q5TAH2 1124 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 DPP9Q86TI2 863 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 ABRAQ8N0Z2 381 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 ARRDC4Q8NCT1 418 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 LBHD1Q9BQE6 289 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-206ENST00000471037 SWAP70Q9UH65 585 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
SF3A1-206ENST00000471037 ZNF532Q9HCE3 1301 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
SF3A1-206ENST00000471037 SEPT4O43236 478 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 ERCC3P19447 782 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 DSG3P32926 999 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-206ENST00000471037 NUCB1Q02818 461 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 SNX17Q15036 470 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 LCORLQ8N3X6 602 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 TANGO6Q9C0B7 1094 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 MROH8Q9H579 483 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 IL1RAPL2Q9NP60 686 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 SLC5A4Q9NY91 659 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-206ENST00000471037 PRKAG2Q9UGJ0 569 aa10.91□□□□□ -0.66
SF3A1-206ENST00000471037 KBTBD13C9JR72 458 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 GOLIM4O00461 696 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 COBLO75128 1261 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
SF3A1-206ENST00000471037 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
SF3A1-206ENST00000471037 KIF1BPQ96EK5 621 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 GUCD1Q96NT3 240 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 LRRCC1Q9C099 1032 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 SH2D4AQ9H788 454 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
SF3A1-206ENST00000471037 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.67
SF3A1-206ENST00000471037 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 WDR46O15213 610 aaKnown RBP10.89□□□□□ -0.67
SF3A1-206ENST00000471037 FLOT1O75955 427 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 ICA1Q05084 483 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 ANKRD45Q5TZF3 282 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 SLC39A5Q6ZMH5 540 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 CHD1LQ86WJ1 897 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
SF3A1-206ENST00000471037 ARHGEF10LQ9HCE6 1279 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms