RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TMEM87AQ8NBN3 555 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 CCDC120Q96HB5 630 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 KRTAP9-9Q9BYP9 154 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 KRTAP9-4Q9BYQ2 154 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 ADAMTS10Q9H324 1103 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 ERVFC1P60507 584 aa9.33□□□□□ -0.92
COL11A1-208ENST00000470170 EGR3Q06889 387 aa9.33□□□□□ -0.92
COL11A1-208ENST00000470170 SEZ6Q53EL9 994 aa9.33□□□□□ -0.92
COL11A1-208ENST00000470170 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
COL11A1-208ENST00000470170 GMIPQ9P107 970 aa9.33□□□□□ -0.92
COL11A1-208ENST00000470170 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 RGS13O14921 159 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 UBOX5O94941 541 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 ATE1O95260 518 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 RAG1P15918 1043 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 LTKP29376 864 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
COL11A1-208ENST00000470170 MESP2Q0VG99 397 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 OVOS1Q6IE37 1185 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 MPZL3Q6UWV2 235 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 FAM53CQ9NYF3 392 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 PCDHA11Q9Y5I1 949 aa9.32□□□□□ -0.92
COL11A1-208ENST00000470170 CHMP4BP1P59074 171 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 CLCQ05315 142 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 APOBRQ0VD83 1088 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 PRR23BQ6ZRT6 265 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 GK5Q6ZS86 529 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 KSR1Q8IVT5 923 aa9.31□□□□□ -0.92
COL11A1-208ENST00000470170 RAC2P15153 192 aa9.3□□□□□ -0.92
COL11A1-208ENST00000470170 MCM4P33991 863 aa9.3□□□□□ -0.92
COL11A1-208ENST00000470170 MFAP1P55081 439 aaKnown RBP9.3□□□□□ -0.92
COL11A1-208ENST00000470170 JAG1P78504 1218 aa9.3□□□□□ -0.92
COL11A1-208ENST00000470170 ABHD4Q8TB40 342 aa9.3□□□□□ -0.92
COL11A1-208ENST00000470170 EHMT1Q9H9B1 1298 aa9.3□□□□□ -0.92
COL11A1-208ENST00000470170 RBM47A0AV96 593 aaKnown RBP9.29□□□□□ -0.92
COL11A1-208ENST00000470170 BACH2Q9BYV9 841 aa9.29□□□□□ -0.92
COL11A1-208ENST00000470170 HPXP02790 462 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 ZGLP1P0C6A0 271 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 TRHRP34981 398 aaPredicted RBP9.28□□□□□ -0.92
COL11A1-208ENST00000470170 FZD5Q13467 585 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 CLEC16AQ2KHT3 1053 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 MYLIPQ8WY64 445 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 ATG4CQ96DT6 458 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
COL11A1-208ENST00000470170 FAM84AQ96KN4 292 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 SLC38A3Q99624 504 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 ANTXR1Q9H6X2 564 aa9.28□□□□□ -0.92
COL11A1-208ENST00000470170 ZNF76P36508 570 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 PKN1Q16512 942 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 CDCP2Q5VXM1 449 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 NKD1Q969G9 470 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 DIRC2Q96SL1 478 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 SPON2Q9BUD6 331 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
COL11A1-208ENST00000470170 RNF4P78317 190 aa9.26□□□□□ -0.93
COL11A1-208ENST00000470170 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
COL11A1-208ENST00000470170 NLRC3Q7RTR2 1065 aa9.26□□□□□ -0.93
COL11A1-208ENST00000470170 SLITRK4Q8IW52 837 aa9.26□□□□□ -0.93
COL11A1-208ENST00000470170 REXO1Q8N1G1 1221 aaKnown RBP9.26□□□□□ -0.93
COL11A1-208ENST00000470170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL11A1-208ENST00000470170 C19orf44Q9H6X5 657 aa9.26□□□□□ -0.93
COL11A1-208ENST00000470170 SP110Q9HB58 689 aa9.26□□□□□ -0.93
COL11A1-208ENST00000470170 ZNF165P49910 485 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 FANCCQ00597 558 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 TEKQ02763 1124 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 SNW1Q13573 536 aaKnown RBP9.25□□□□□ -0.93
COL11A1-208ENST00000470170 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 NBPF12Q5TAG4 269 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-208ENST00000470170 TMC3Q7Z5M5 1100 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 ZNF512BQ96KM6 892 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-208ENST00000470170 ASCC2Q9H1I8 757 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-208ENST00000470170 NSUN3Q9H649 340 aaKnown RBP9.25□□□□□ -0.93
COL11A1-208ENST00000470170 PCDHGB7Q9Y5F8 929 aa9.25□□□□□ -0.93
COL11A1-208ENST00000470170 USP48Q86UV5 1035 aa9.24□□□□□ -0.93
COL11A1-208ENST00000470170 HDAC8Q9BY41 377 aa9.24□□□□□ -0.93
COL11A1-208ENST00000470170 RNF32Q9H0A6 362 aa9.24□□□□□ -0.93
COL11A1-208ENST00000470170 KCNK12Q9HB15 430 aa9.24□□□□□ -0.93
COL11A1-208ENST00000470170 NBPF9Q3BBW0 867 aa9.23□□□□□ -0.93
COL11A1-208ENST00000470170 TIGD5Q53EQ6 642 aa9.23□□□□□ -0.93
COL11A1-208ENST00000470170 EBF1Q9UH73 591 aa9.23□□□□□ -0.93
COL11A1-208ENST00000470170 DBX1A6NMT0 343 aa9.22□□□□□ -0.93
COL11A1-208ENST00000470170 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
COL11A1-208ENST00000470170 CLEC3AO75596 197 aa9.22□□□□□ -0.93
COL11A1-208ENST00000470170 NME1P15531 152 aaKnown RBP9.22□□□□□ -0.93
COL11A1-208ENST00000470170 SYDE1Q6ZW31 735 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-208ENST00000470170 SYTL5Q8TDW5 730 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-208ENST00000470170 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
COL11A1-208ENST00000470170 SYTL4Q96C24 671 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-208ENST00000470170 RAD51AP2Q09MP3 1159 aa9.21□□□□□ -0.94
COL11A1-208ENST00000470170 TMEM192Q8IY95 271 aa9.21□□□□□ -0.94
COL11A1-208ENST00000470170 OXR1Q8N573 874 aa9.21□□□□□ -0.94
COL11A1-208ENST00000470170 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
COL11A1-208ENST00000470170 FITM1A5D6W6 292 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 CCNFP41002 786 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms