RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 VCAM1P19320 739 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 GCLCP48506 637 aaPredicted RBP22.89■■□□□ 1.25
PCGF3-208ENST00000470161 PPP4R3BQ5MIZ7 849 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 AKNAD1Q5T1N1 836 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 CD99L2Q8TCZ2 262 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 LPAR1Q92633 364 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.89■■□□□ 1.25
PCGF3-208ENST00000470161 USP26Q9BXU7 913 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 NYAP2Q9P242 653 aa22.89■■□□□ 1.25
PCGF3-208ENST00000470161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.89■■□□□ 1.252e-6■■■■■ 29.8
PCGF3-208ENST00000470161 SIAH1Q8IUQ4 282 aa22.88■■□□□ 1.25
PCGF3-208ENST00000470161 VCPKMTQ9H867 229 aa22.88■■□□□ 1.25
PCGF3-208ENST00000470161 CLIP2Q9UDT6 1046 aa22.88■■□□□ 1.25
PCGF3-208ENST00000470161 LOC285556D6RIA3 1793 aa22.88■■□□□ 1.25
PCGF3-208ENST00000470161 ORC4O43929 436 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 TTLL1O95922 423 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 CEP95Q96GE4 821 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 RPAP3Q9H6T3 665 aaPredicted RBP22.87■■□□□ 1.25
PCGF3-208ENST00000470161 EFCC1Q9HA90 598 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 MTMR4Q9NYA4 1195 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 LACTBP83111 547 aaPredicted RBP22.87■■□□□ 1.25
PCGF3-208ENST00000470161 BECN1Q14457 450 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 SPICE1Q8N0Z3 855 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 ANKRD13CQ8N6S4 541 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 P2RX7Q99572 595 aaKnown RBP22.87■■□□□ 1.25
PCGF3-208ENST00000470161 TANGO6Q9C0B7 1094 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 TRIM17Q9Y577 477 aa22.87■■□□□ 1.25
PCGF3-208ENST00000470161 ADGRA2Q96PE1 1338 aa22.86■■□□□ 1.25
PCGF3-208ENST00000470161 ECM2O94769 699 aaPredicted RBP22.86■■□□□ 1.25
PCGF3-208ENST00000470161 FGRP09769 529 aa22.86■■□□□ 1.25
PCGF3-208ENST00000470161 STAG1Q8WVM7 1258 aa22.86■■□□□ 1.25
PCGF3-208ENST00000470161 KIF2CQ99661 725 aa22.86■■□□□ 1.25
PCGF3-208ENST00000470161 STX8Q9UNK0 236 aa22.86■■□□□ 1.25
PCGF3-208ENST00000470161 BCRP11274 1271 aa22.85■■□□□ 1.25
PCGF3-208ENST00000470161 HERVK_113P62684 666 aa22.85■■□□□ 1.25
PCGF3-208ENST00000470161 PKN2Q16513 984 aaKnown RBP22.85■■□□□ 1.25
PCGF3-208ENST00000470161 CATSPERGQ6ZRH7 1159 aa22.85■■□□□ 1.25
PCGF3-208ENST00000470161 GTF3C2Q8WUA4 911 aaPredicted RBP22.85■■□□□ 1.25
PCGF3-208ENST00000470161 ESR2Q92731 530 aa22.85■■□□□ 1.25
PCGF3-208ENST00000470161 U3KPZ7 1027 aaPredicted RBP22.85■■□□□ 1.25
PCGF3-208ENST00000470161 IGKV6D-41A0A0C4DH26 115 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 PTH1RQ03431 593 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 TBC1D10CQ8IV04 446 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 MCOLN1Q9GZU1 580 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 PLIN4Q96Q06 1357 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 WDR46O15213 610 aaKnown RBP22.84■■□□□ 1.25
PCGF3-208ENST00000470161 FMNL1O95466 1100 aaPredicted RBP22.84■■□□□ 1.25
PCGF3-208ENST00000470161 FAM110CQ1W6H9 321 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 LAMA4Q16363 1823 aa22.84■■□□□ 1.25
PCGF3-208ENST00000470161 PSMC4P43686 418 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 COG2Q14746 738 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 OTOP1Q7RTM1 612 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 NBPF3Q9H094 633 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 ANO2Q9NQ90 1003 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 HOXC10Q9NYD6 342 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 TACC3Q9Y6A5 838 aa22.83■■□□□ 1.24
PCGF3-208ENST00000470161 F5H6K3 240 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 NT5C2P49902 561 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 KLRC3Q07444 240 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 SAMD1Q6SPF0 538 aaPredicted RBP22.82■■□□□ 1.24
PCGF3-208ENST00000470161 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
PCGF3-208ENST00000470161 MKL1Q969V6 931 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 PAGR1Q9BTK6 254 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 KRT23Q9C075 422 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 CNNM2Q9H8M5 875 aa22.82■■□□□ 1.24
PCGF3-208ENST00000470161 FLOT1O75955 427 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 GNRH1P01148 92 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 HOXD10P28358 340 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 FCGRTP55899 365 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 TRDNQ13061 729 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 KIAA1755Q5JYT7 1200 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 LRRC47Q8N1G4 583 aaKnown RBP22.81■■□□□ 1.24
PCGF3-208ENST00000470161 SYNPO2Q9UMS6 1093 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 GREB1LQ9C091 1923 aaPredicted RBP22.81■■□□□ 1.24
PCGF3-208ENST00000470161 NMT2O60551 498 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 GPRC5AQ8NFJ5 357 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 MAP4K1Q92918 833 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 ARHGAP39Q9C0H5 1083 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 IL17RBQ9NRM6 502 aa22.81■■□□□ 1.24
PCGF3-208ENST00000470161 FBXO46Q6PJ61 603 aaPredicted RBP22.8■■□□□ 1.24
PCGF3-208ENST00000470161 ISY1Q9ULR0 285 aaKnown RBP22.8■■□□□ 1.24
PCGF3-208ENST00000470161 NEDD4P46934 1319 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 B4E1Z4 1266 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 KDM4AO75164 1064 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 FAM83BQ5T0W9 1011 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 TCP11L1Q9NUJ3 509 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
PCGF3-208ENST00000470161 RBM8AQ9Y5S9 174 aaKnown RBP22.79■■□□□ 1.24
PCGF3-208ENST00000470161 NDUFB10O96000 172 aa22.78■■□□□ 1.24
PCGF3-208ENST00000470161 GMCL1P1Q8NEA9 526 aa22.78■■□□□ 1.24
PCGF3-208ENST00000470161 TRIM47Q96LD4 638 aa22.78■■□□□ 1.24
PCGF3-208ENST00000470161 RBPJLQ9UBG7 517 aa22.78■■□□□ 1.24
PCGF3-208ENST00000470161 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
PCGF3-208ENST00000470161 TNPO2O14787 897 aaKnown RBP22.77■■□□□ 1.24
PCGF3-208ENST00000470161 CYP21A2P08686 494 aa22.77■■□□□ 1.24
PCGF3-208ENST00000470161 CCNA1P78396 465 aa22.77■■□□□ 1.24
PCGF3-208ENST00000470161 CCDC178Q5BJE1 867 aa22.77■■□□□ 1.24
PCGF3-208ENST00000470161 SLFN13Q68D06 897 aa22.77■■□□□ 1.24
PCGF3-208ENST00000470161 COA7Q96BR5 231 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms