RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
TMEM50B-206ENST00000468874 PTCH2Q9Y6C5 1203 aa9.22□□□□□ -0.93
TMEM50B-206ENST00000468874 A0A0C4DFX4 3053 aa9.21□□□□□ -0.93
TMEM50B-206ENST00000468874 TRIOBPQ9H2D6 2365 aa9.21□□□□□ -0.93
TMEM50B-206ENST00000468874 WNT10BO00744 389 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 OIP5O43482 229 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 MAPTP10636 758 aaKnown RBP9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 BMP4P12644 408 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 GSK3AP49840 483 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 KIF22Q14807 665 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 NBPF9Q3BBW0 867 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 DEFB123Q8N688 67 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 WNK4Q96J92 1243 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 PRDM6Q9NQX0 595 aa9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 GDF2Q9UK05 429 aaPredicted RBP9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 KIAA0100Q14667 2235 aaKnown RBP9.21□□□□□ -0.94
TMEM50B-206ENST00000468874 BMP8BP34820 402 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 EIF4A1P60842 406 aaKnown RBP9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 DIEXFQ68CQ4 756 aaKnown RBP9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 CELF1Q92879 486 aaKnown RBP9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 ZFYVE28Q9HCC9 887 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 NUDCQ9Y266 331 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
TMEM50B-206ENST00000468874 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 HTTP42858 3142 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 KHNYNO15037 678 aaKnown RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 EFSO43281 561 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 HSP90B1P14625 803 aaKnown RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 GJA8P48165 433 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 LAMC2Q13753 1193 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 PRKG1Q13976 671 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 SUPT20HL1Q3ZLR7 823 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 UBE2Q1Q7Z7E8 422 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 C2orf49Q9BVC5 232 aaPredicted RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 HCN4Q9Y3Q4 1203 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 PPP2R3BQ9Y5P8 575 aa9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
TMEM50B-206ENST00000468874 COL6A3P12111 3177 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 BRCA2P51587 3418 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 DCDC2BA2VCK2 349 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 LRRC37AA6NMS7 1700 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 UFL1O94874 794 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 COL1A1P02452 1464 aaPredicted RBP9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 GJB1P08034 283 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 IREB2P48200 963 aaKnown RBP9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 C1orf229Q6ZS94 237 aaPredicted RBP9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 KDM3BQ7LBC6 1761 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 RHPN1Q8TCX5 695 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 SCARF2Q96GP6 870 aaPredicted RBP9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 HINFPQ9BQA5 517 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 PHACTR1Q9C0D0 580 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 MIS18AQ9NYP9 233 aa9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 SCAF8Q9UPN6 1271 aaKnown RBP9.18□□□□□ -0.94
TMEM50B-206ENST00000468874 CUL9Q8IWT3 2517 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 CENPFP49454 3210 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 ARAFP10398 606 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 HOXD10P28358 340 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 DCTN1Q14203 1278 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 LRIT3Q3SXY7 679 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 CFAP53Q96M91 514 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 PTPN18Q99952 460 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 DEFB129Q9H1M3 183 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
TMEM50B-206ENST00000468874 IGFBP4P22692 258 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 CAP1Q01518 475 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 STRIP1Q5VSL9 837 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 NEDD1Q8NHV4 660 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 AVENQ9NQS1 362 aaPredicted RBP9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 STAP2Q9UGK3 403 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 LAMB4A4D0S4 1761 aa9.16□□□□□ -0.94
TMEM50B-206ENST00000468874 NEFMP07197 916 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 CD33P20138 364 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 RFX1P22670 979 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 GTF2A2P52657 109 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 UBXN2AP68543 259 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 LACTBP83111 547 aaPredicted RBP9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 DACT2Q5SW24 774 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 COPS6Q7L5N1 327 aa9.15□□□□□ -0.94
TMEM50B-206ENST00000468874 ALDH16A1Q8IZ83 802 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms