RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 A0A0G2JMZ2 1700 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 GRK4P32298 578 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 IRF5Q13568 498 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 GPRC5AQ8NFJ5 357 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 RBPJLQ9UBG7 517 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 GABRQQ9UN88 632 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
COL27A1-203ENST00000468565 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 LPAR1Q92633 364 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 FLT3LGP49771 235 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 NAPBQ9H115 298 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-203ENST00000468565 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
COL27A1-203ENST00000468565 BRCA2P51587 3418 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 POTEFA5A3E0 1075 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 RASA1P20936 1047 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 ERVK-24P63145 666 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 PXYLP1Q8TE99 480 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
COL27A1-203ENST00000468565 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 POTEEQ6S8J3 1075 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 PDE4DIPQ5VU43 2346 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-203ENST00000468565 EEF2P13639 858 aaKnown RBP17.21■□□□□ 0.35
COL27A1-203ENST00000468565 MAPK4P31152 587 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 CCDC129Q6ZRS4 1044 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL27A1-203ENST00000468565 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
COL27A1-203ENST00000468565 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-203ENST00000468565 SPDYE16A6NNV3 312 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-203ENST00000468565 FOXP2O15409 715 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 ADCY3O60266 1144 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
COL27A1-203ENST00000468565 UBXN2AP68543 259 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 PPARAQ07869 468 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 Q3C1V9 767 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
COL27A1-203ENST00000468565 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
COL27A1-203ENST00000468565 CNMDO75829 334 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 PDE4BQ07343 736 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 COG2Q14746 738 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 KIAA1755Q5JYT7 1200 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 GJD2Q9UKL4 321 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 PLIN4Q96Q06 1357 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 PEX10O60683 326 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 CCNA1P78396 465 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-203ENST00000468565 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
COL27A1-203ENST00000468565 IGKV6D-41A0A0C4DH26 115 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-203ENST00000468565 ALX1Q15699 326 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 SOCS4Q8WXH5 440 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 PORCNQ9H237 461 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 BIN2Q9UBW5 565 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-203ENST00000468565 LAMA4Q16363 1823 aa17.18■□□□□ 0.34
COL27A1-203ENST00000468565 SDSP20132 328 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 MTFR1Q15390 333 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
COL27A1-203ENST00000468565 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 PRDM1O75626 825 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 ELNP15502 786 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 EN2P19622 333 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-203ENST00000468565 DSG3P32926 999 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 GPR142Q7Z601 462 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 SYNPO2Q9UMS6 1093 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
COL27A1-203ENST00000468565 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-203ENST00000468565 INHAP05111 366 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 CCL5P13501 91 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 PLEKHH3Q7Z736 793 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
COL27A1-203ENST00000468565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL27A1-203ENST00000468565 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms