RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TTLL1	O95922	423 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	PARP1	P09874	1014 aa	Known RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	RPS12	P25398	132 aa	Known RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	PRELP	P51888	382 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	EIF6	P56537	245 aa	Known RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	PPP4R3B	Q5MIZ7	849 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	RASGRP2	Q7LDG7	609 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	CLEC10A	Q8IUN9	316 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	FOXP4	Q8IVH2	680 aa	Predicted RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	DIS3L2	Q8IYB7	885 aa	Known RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	LRRC47	Q8N1G4	583 aa	Known RBP	14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	STAG2	Q8N3U4	1231 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	LZTS2	Q9BRK4	669 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	VEZT	Q9HBM0	779 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	RTEL1	Q9NZ71	1219 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	VPS54	Q9P1Q0	977 aa		14.21	□□□□□ -0.13
HDLBP-231	ENST00000467435	SCG2	P13521	617 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	U2AF2	P26368	475 aa	Known RBP eCLIP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	MMP14	P50281	582 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	PFKFB3	Q16875	520 aa	Predicted RBP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	CERKL	Q49MI3	558 aa	Predicted RBP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	TATDN1	Q6P1N9	297 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	METTL16	Q86W50	562 aa	Known RBP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	FAM151A	Q8WW52	585 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	SHISA4	Q96DD7	197 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	ZBED3	Q96IU2	234 aa	Predicted RBP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	CSRNP1	Q96S65	589 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	PHF20	Q9BVI0	1012 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	FOXP1	Q9H334	677 aa	Predicted RBP	14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	MYOZ2	Q9NPC6	264 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	POLR3E	Q9NVU0	708 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	RCOR1	Q9UKL0	485 aa		14.2	□□□□□ -0.14
HDLBP-231	ENST00000467435	SHTN1	A0MZ66	631 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	GOLGA6L3	A6NEY3	463 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	FZD9	O00144	591 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	YEATS4	O95619	227 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	GOLGA8H	P0CJ92	632 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	KRT2	P35908	639 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	NASP	P49321	788 aa	Predicted RBP	14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	ZNF280A	P59817	542 aa	Predicted RBP	14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	ZNF445	P59923	1031 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	STK38	Q15208	465 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	CCDC183	Q5T5S1	534 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	FKBP1C	Q5VVH2	108 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	NOSTRIN	Q8IVI9	506 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	BICD2	Q8TD16	824 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	PIBF1	Q8WXW3	757 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	PGBD1	Q96JS3	809 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	FHDC1	Q9C0D6	1143 aa	Predicted RBP	14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	CLIP2	Q9UDT6	1046 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	CLIC4	Q9Y696	253 aa		14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	BAZ2B	Q9UIF8	2168 aa	Known RBP	14.19	□□□□□ -0.14
HDLBP-231	ENST00000467435	ZNF541	Q9H0D2	1346 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	USP17L5	A8MUK1	530 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	BTBD18	B2RXH4	712 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	SOCS7	O14512	581 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	GDF11	O95390	407 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	PDHB	P11177	359 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	GMPS	P49915	693 aa	Predicted RBP	14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	ASPRV1	Q53RT3	343 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	ANO1	Q5XXA6	986 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	USP17L2	Q6R6M4	530 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	TMEM179	Q6ZVK1	233 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	SPZ1	Q9BXG8	430 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	BRMS1	Q9HCU9	246 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	HERC5	Q9UII4	1024 aa	Known RBP	14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	ISY1	Q9ULR0	285 aa	Known RBP	14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	GJA3	Q9Y6H8	435 aa		14.18	□□□□□ -0.14
HDLBP-231	ENST00000467435	FRMPD2	Q68DX3	1309 aa	Predicted RBP	14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	SYCE3	A1L190	88 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	FSD2	A1L4K1	749 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	KLRF2	D3W0D1	207 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	WNT10B	O00744	389 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	CYTH3	O43739	400 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	ATP2B2	Q01814	1243 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	SF3A1	Q15459	793 aa	Known RBP	14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	ABCB5	Q2M3G0	1257 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	SHROOM1	Q2M3G4	852 aa	Predicted RBP	14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	SLC35G1	Q2M3R5	365 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	NBPF9	Q3BBW0	867 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	FAM83A	Q86UY5	434 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	MICALL2	Q8IY33	904 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	LINC00301	Q8NCQ3	95 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	KCNG4	Q8TDN1	519 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	OXER1	Q8TDS5	423 aa		14.17	□□□□□ -0.14
HDLBP-231	ENST00000467435	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	14.17	□□□□□ -0.14	3e-9	■□□□□ 8.7
HDLBP-231	ENST00000467435	SPTLC2	O15270	562 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	SNHG28	P0DPA3	235 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	LIG1	P18858	919 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	SMARCA1	P28370	1054 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	ME1	P48163	572 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	TNNI2	P48788	182 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	NLRP5	P59047	1200 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	ICA1	Q05084	483 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	NR5A1	Q13285	461 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	SEPT2	Q15019	361 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	L1TD1	Q5T7N2	865 aa	Known RBP	14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	RBM26	Q5T8P6	1007 aa	Known RBP	14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	ARHGAP27	Q6ZUM4	889 aa		14.16	□□□□□ -0.14
HDLBP-231	ENST00000467435	DPF2	Q92785	391 aa		14.16	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms