RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 MAN1B1Q9UKM7 699 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SPATA31A6Q5VVP1 1343 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 MYO3BQ8WXR4 1341 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 LRRC10BA6NIK2 292 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 PRKAB2O43741 272 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 LMOD1P29536 600 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-204ENST00000466351 TXLNAP40222 546 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 EVX2Q03828 476 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 PNOCQ13519 176 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 NPY5RQ15761 445 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 CFAP100Q494V2 611 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 CCDC93Q567U6 631 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 TTC38Q5R3I4 469 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 UTP14CQ5TAP6 766 aaKnown RBP7.8□□□□□ -1.16
CDHR3-204ENST00000466351 CDKAL1Q5VV42 579 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 SLF2Q8IX21 1173 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 FNBP4Q8N3X1 1017 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-204ENST00000466351 IQUBQ8NA54 791 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 LINC00116Q8NCU8 138 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 CCDC12Q8WUD4 166 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-204ENST00000466351 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 MYL10Q9BUA6 226 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 GJB4Q9NTQ9 266 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
CDHR3-204ENST00000466351 SUGT1Q9Y2Z0 365 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 NFE2L3Q9Y4A8 694 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 PCDHB6Q9Y5E3 794 aa7.8□□□□□ -1.16
CDHR3-204ENST00000466351 XDHP47989 1333 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 SYNRGQ9UMZ2 1314 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ESYT2A0FGR8 921 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 POLR2DO15514 142 aaKnown RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 SLC26A4O43511 780 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ATP8B1O43520 1251 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 TOM1O60784 492 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ZPR1O75312 459 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 BAG3O95817 575 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 RXRAP19793 462 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 BMP6P22004 513 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 GUCY1A2P33402 732 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 GYG1P46976 350 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 MECOMQ03112 1051 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 DPYDQ12882 1025 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 CUL4BQ13620 913 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 KCNB1Q14721 858 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 GRM4Q14833 912 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 E2F4Q16254 413 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 FILIP1LQ4L180 1135 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 RRP12Q5JTH9 1297 aaKnown RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ZNF804AQ7Z570 1209 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 NBPF5PQ86XG9 351 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 TMEM139Q8IV31 216 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 CNGA4Q8IV77 575 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 FOXP4Q8IVH2 680 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 TEX2Q8IWB9 1127 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 MIGA1Q8NAN2 632 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 NKX2-3Q8TAU0 364 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 FAM163AQ96GL9 167 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 AK8Q96MA6 479 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 SPZ1Q9BXG8 430 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 OGFRQ9NZT2 677 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 MYO1AQ9UBC5 1043 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ABCF2Q9UG63 623 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 ATAD5Q96QE3 1844 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 RGPD3A6NKT7 1758 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-204ENST00000466351 RGPD4Q7Z3J3 1758 aa7.79□□□□□ -1.16
CDHR3-204ENST00000466351 EFCAB8A8MWE9 144 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 USP17L21D6R901 530 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 BIN1O00499 593 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 GTPBP6O43824 516 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 TUBBP07437 444 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 ATP1A3P13637 1013 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 PBX1P40424 430 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 NOVP48745 357 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 RBM10P98175 930 aaKnown RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 GABPB1Q06547 395 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 NR5A1Q13285 461 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 GRAPQ13588 217 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 CRY2Q49AN0 593 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 C12orf60Q5U649 245 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 JAKMIP3Q5VZ66 844 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 RAB11FIP4Q86YS3 637 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 MPNDQ8N594 471 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 GRAPLQ8TC17 118 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 ZNF384Q8TF68 577 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 NOC3LQ8WTT2 800 aaKnown RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 TBC1D22AQ8WUA7 517 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 NUP133Q8WUM0 1156 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 SDR42E1Q8WUS8 393 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 CCSER1Q9C0I3 900 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms