RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 RAG1P15918 1043 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 ADMP35318 185 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 DUSP27Q5VZP5 1158 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 TTC6Q86TZ1 520 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 GATA6Q92908 595 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 SLC9A7Q96T83 725 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 TRIM55Q9BYV6 548 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 TNKS2Q9H2K2 1166 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 SSU72Q9NP77 194 aaKnown RBP5.84□□□□□ -1.47
SAMM50-202ENST00000465768 PAK6Q9NQU5 681 aaPredicted RBP5.84□□□□□ -1.47
SAMM50-202ENST00000465768 SIRPGQ9P1W8 387 aa5.84□□□□□ -1.47
SAMM50-202ENST00000465768 R3HCC1Q9Y3T6 440 aaKnown RBP5.84□□□□□ -1.47
SAMM50-202ENST00000465768 FAM170BA6NMN3 283 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 RGS13O14921 159 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 DYNC1LI2O43237 492 aaPredicted RBP5.83□□□□□ -1.48
SAMM50-202ENST00000465768 NFICP08651 508 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 UNC5AQ6ZN44 842 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 PHACTR4Q8IZ21 702 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 STK11IPQ8N1F8 1099 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 MKL1Q969V6 931 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 CCDC74BQ96LY2 380 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 MSRB2Q9Y3D2 182 aa5.83□□□□□ -1.48
SAMM50-202ENST00000465768 UBOX5O94941 541 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
SAMM50-202ENST00000465768 ZYXQ15942 572 aaKnown RBP5.82□□□□□ -1.48
SAMM50-202ENST00000465768 PPP2R5EQ16537 467 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 DDR2Q16832 855 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 CCDC144BQ3MJ40 725 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 SHISA5Q8N114 240 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 CELF2-AS1Q8N7Q2 184 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 PPP1R13LQ8WUF5 828 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 PHAXQ9H814 394 aaKnown RBP5.82□□□□□ -1.48
SAMM50-202ENST00000465768 C1GALT1Q9NS00 363 aa5.82□□□□□ -1.48
SAMM50-202ENST00000465768 LTBP3Q9NS15 1303 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 U2SURPO15042 1029 aaKnown RBP5.81□□□□□ -1.48
SAMM50-202ENST00000465768 FXNQ16595 210 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 LRP10Q7Z4F1 713 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 DNAJB8Q8NHS0 232 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 BAHD1Q8TBE0 780 aaPredicted RBP5.81□□□□□ -1.48
SAMM50-202ENST00000465768 KIF2CQ99661 725 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 LRRC4CQ9HCJ2 640 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 PRDM10Q9NQV6 1147 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 ZC3H7BQ9UGR2 993 aaKnown RBP5.81□□□□□ -1.48
SAMM50-202ENST00000465768 MAPK8IP1Q9UQF2 711 aa5.81□□□□□ -1.48
SAMM50-202ENST00000465768 BIN1O00499 593 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 SLITRK5O94991 958 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 CDK5R2Q13319 367 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 RASA3Q14644 834 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 NFE2L2Q16236 605 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 LARP1BQ659C4 914 aaKnown RBP5.8□□□□□ -1.48
SAMM50-202ENST00000465768 LETMD1Q6P1Q0 360 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 ZNF765Q7L2R6 523 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 XAGE3Q8WTP9 111 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 MISP3Q96FF7 219 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 SLC6A18Q96N87 628 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 MIPEPQ99797 713 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.8□□□□□ -1.48
SAMM50-202ENST00000465768 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
SAMM50-202ENST00000465768 SLC5A6Q9Y289 635 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 NACADO15069 1562 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 RB1CC1Q8TDY2 1594 aa5.8□□□□□ -1.48
SAMM50-202ENST00000465768 PAPLNO95428 1278 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 GBP1P32455 592 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 ETV3P41162 512 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 PMS1P54277 932 aaKnown RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 ZNF746Q6NUN9 644 aaPredicted RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 NOP9Q86U38 636 aaKnown RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 FAM178BQ8IXR5 827 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 TMEM192Q8IY95 271 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 TOP6BLQ8N6T0 577 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 KLHL6Q8WZ60 621 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 DHRS1Q96LJ7 313 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 DUSP23Q9BVJ7 150 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 PIF1Q9H611 641 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 ZSWIM4Q9H7M6 989 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 LGR6Q9HBX8 967 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 SNTG2Q9NY99 539 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 SUCOQ9UBS9 1254 aaKnown RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 CEP131Q9UPN4 1083 aa5.79□□□□□ -1.48
SAMM50-202ENST00000465768 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
SAMM50-202ENST00000465768 FAM86C2PA6NEL3 165 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 B2RBV5 119 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 CLEC3AO75596 197 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 GJB6O95452 261 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 EOMESO95936 686 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 BMS1Q14692 1282 aaKnown RBP5.78□□□□□ -1.48
SAMM50-202ENST00000465768 NCAPHQ15003 741 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 PLCL1Q15111 1095 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 BBS9Q3SYG4 887 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 VHLLQ6RSH7 139 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 C6orf15Q6UXA7 325 aaPredicted RBP5.78□□□□□ -1.48
SAMM50-202ENST00000465768 PPFIBP1Q86W92 1011 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 DEPDC7Q96QD5 511 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
SAMM50-202ENST00000465768 FAM87AP0C7U9 286 aa5.77□□□□□ -1.49
SAMM50-202ENST00000465768 RNF4P78317 190 aa5.77□□□□□ -1.49
SAMM50-202ENST00000465768 SLC7A5Q01650 507 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms